Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PIP5K1P1 (phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1)

Identity

Alias_namesphosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1
Alias_symbol (synonym)MGC26597
Other alias-
HGNC (Hugo) PIP5K1P1
LocusID (NCBI) 206426
Atlas_Id 71926
Location 6p24.3  [Link to chromosome band 6p24]
Location_base_pair Starts at 7986102 and ends at 7990344 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PIP5K1P1   28372
Cards
Entrez_Gene (NCBI)PIP5K1P1  206426  phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1
Aliases
GeneCards (Weizmann)PIP5K1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:7986102-7990344 [Contig_View]  PIP5K1P1 [Vega]
TCGA cBioPortalPIP5K1P1
AceView (NCBI)PIP5K1P1
Genatlas (Paris)PIP5K1P1
WikiGenes206426
SOURCE (Princeton)PIP5K1P1
Genetics Home Reference (NIH)PIP5K1P1
Genomic and cartography
GoldenPath hg38 (UCSC)PIP5K1P1  -     chr6:7986102-7990344 +  6p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PIP5K1P1  -     6p24.3   [Description]    (hg19-Feb_2009)
EnsemblPIP5K1P1 - 6p24.3 [CytoView hg19]  PIP5K1P1 - 6p24.3 [CytoView hg38]
Mapping of homologs : NCBIPIP5K1P1 [Mapview hg19]  PIP5K1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK312819 BC028580 DQ891574 DQ894768
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PIP5K1P1
Cluster EST : UnigeneHs.676966 [ NCBI ]
CGAP (NCI)Hs.676966
Gene ExpressionPIP5K1P1 [ NCBI-GEO ]   PIP5K1P1 [ EBI - ARRAY_EXPRESS ]   PIP5K1P1 [ SEEK ]   PIP5K1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)PIP5K1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)206426
GTEX Portal (Tissue expression)PIP5K1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PIP5K1P1
DMDM Disease mutations206426
Blocks (Seattle)PIP5K1P1
IPIIPI00152313   
Protein Interaction databases
BioGRIDPIP5K1P1
STRING (EMBL)PIP5K1P1
ZODIACPIP5K1P1
Ontologies - Pathways
Huge Navigator PIP5K1P1 [HugePedia]
snp3D : Map Gene to Disease206426
BioCentury BCIQPIP5K1P1
ClinGenPIP5K1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD206426
Clinical trialPIP5K1P1
Miscellaneous
canSAR (ICR)PIP5K1P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePIP5K1P1
EVEXPIP5K1P1
GoPubMedPIP5K1P1
iHOPPIP5K1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:23:58 CEST 2018

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