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PISRT1 (polled intersex syndrome regulated transcript 1 (non-protein coding RNA))

Identity

Alias_namespolled intersex syndrome regulated transcript 1 homolog (goat)
Alias_symbol (synonym)NCRNA00195
Other alias
HGNC (Hugo) PISRT1
LocusID (NCBI) 140464
Atlas_Id 71930
Location 3q23  [Link to chromosome band 3q23]
Location_base_pair Starts at 139232992 and ends at 139233522 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PISRT1   16671
Cards
Entrez_Gene (NCBI)PISRT1  140464  polled intersex syndrome regulated transcript 1 (non-protein coding RNA)
AliasesNCRNA00195
GeneCards (Weizmann)PISRT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:139232992-139233522 [Contig_View]  PISRT1 [Vega]
TCGA cBioPortalPISRT1
AceView (NCBI)PISRT1
Genatlas (Paris)PISRT1
WikiGenes140464
SOURCE (Princeton)PISRT1
Genetics Home Reference (NIH)PISRT1
Genomic and cartography
GoldenPath hg38 (UCSC)PISRT1  -     chr3:139232992-139233522 -  3q23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PISRT1  -     3q23   [Description]    (hg19-Feb_2009)
EnsemblPISRT1 - 3q23 [CytoView hg19]  PISRT1 - 3q23 [CytoView hg38]
Mapping of homologs : NCBIPISRT1 [Mapview hg19]  PISRT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI204197 AW268472
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PISRT1
Cluster EST : UnigeneHs.721270 [ NCBI ]
CGAP (NCI)Hs.721270
Gene ExpressionPISRT1 [ NCBI-GEO ]   PISRT1 [ EBI - ARRAY_EXPRESS ]   PISRT1 [ SEEK ]   PISRT1 [ MEM ]
Gene Expression Viewer (FireBrowse)PISRT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)140464
GTEX Portal (Tissue expression)PISRT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PISRT1
DMDM Disease mutations140464
Blocks (Seattle)PISRT1
Protein Interaction databases
BioGRIDPISRT1
STRING (EMBL)PISRT1
ZODIACPISRT1
Ontologies - Pathways
Huge Navigator PISRT1 [HugePedia]
snp3D : Map Gene to Disease140464
BioCentury BCIQPISRT1
ClinGenPISRT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140464
Chemical/Pharm GKB GenePA33334
Clinical trialPISRT1
Miscellaneous
canSAR (ICR)PISRT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePISRT1
EVEXPISRT1
GoPubMedPISRT1
iHOPPISRT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:34:35 CEST 2017

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