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PITPNA (phosphatidylinositol transfer protein, alpha)

Identity

Other namesPI-TPalpha
PITPN
VIB1A
HGNC (Hugo) PITPNA
LocusID (NCBI) 5306
Location 17p13.3
Location_base_pair Starts at 1421283 and ends at 1466110 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)PITPNA   9001
Entrez_Gene (NCBI)PITPNA  5306  phosphatidylinositol transfer protein, alpha
Cards
GeneCards (Weizmann)PITPNA
Ensembl (Hinxton)ENSG00000174238 [Gene_View]  chr17:1421283-1466110 [Contig_View]  PITPNA [Vega]
AceView (NCBI)PITPNA
Genatlas (Paris)PITPNA
SOURCE (Stanford)NM_006224
Genomic and cartography
GoldenPath (UCSC)PITPNA  -  17p13.3   chr17:1421283-1466110 -  17p13.3   [Description]    (hg19-Feb_2009)
EnsemblPITPNA - 17p13.3 [CytoView]
Mapping of homologs : NCBIPITPNA [Mapview]
OMIM600174   
Gene and transcription
Genbank (Entrez)AK303986 AL117644 AL542612 BC027177 BC045108
RefSeq transcript (SRS)NM_006224
RefSeq transcript (Entrez)NM_006224
RefSeq genomic (SRS)AC_000149 NC_000017 NC_018928 NG_013017 NT_010718 NW_001838403 NW_004078090
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NG_013017 NT_010718 NW_001838403 NW_004078090
Consensus coding sequences : CCDS (NCBI)PITPNA
Cluster EST : UnigeneHs.429819 [ SRS ] Hs.429819 [ NCBI ]
CGAP (NCI)Hs.429819
Alternative Splicing : Fast-db (Paris)GSHG0012959
Alternative Splicing GalleryENSG00000174238
Gene ExpressionPITPNA [ NCBI-GEO ]   PITPNA [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ00169 (SRS) Q00169 (Uniprot)
NextProtQ00169
With graphics : InterProQ00169
Splice isoforms : SwissVarQ00169(Swissvar)
Domains : Interpro (SRS)PI_transfer    START-like_dom   
Domains : Interpro (EBI)PI_transfer    START-like_dom   
Related proteins : CluSTrQ00169
Domain families : Pfam (SRS)IP_trans (PF02121)   
Domain families : Pfam (Sanger)IP_trans (PF02121)   
Domain families : Pfam (NCBI)pfam02121   
DMDM5306
Blocks (Seattle)Q00169
PDB (SRS)1UW5   
PDB (PDBSum)1UW5   
PDB (IMB)1UW5   
PDB (RSDB)1UW5   
Human Protein AtlasENSG00000174238
HPRD02548
IPIIPI00216048   IPI01011252   IPI01012671   
Protein Interaction databases
DIP (DOE-UCLA)Q00169
IntAct (EBI)Q00169
FunCoupENSG00000174238
REACTOMEPITPNA
Protein Interaction Database5306
BioGRIDPITPNA
InParanoidQ00169
Interologous Interaction database Q00169
IntegromeDBPITPNA
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)PITPNA
SNP (GeneSNP Utah)PITPNA
SNP : HGBasePITPNA
Genetic variants : HAPMAPPITPNA
Somatic Mutations in Cancer : COSMICPITPNA 
CONAN: Copy Number AnalysisPITPNA 
Mutations and Diseases : HGMDPITPNA
OMIM600174   
GENETests600174   
Disease Genetic AssociationPITPNA
Huge Navigator PITPNA [HugePedia]  PITPNA [HugeCancerGEM]
Genomic VariantsPITPNA  PITPNA [DGVbeta]
snp3D : Map Gene to Disease5306
General knowledge
Homologs : HomoloGenePITPNA
Homology/Alignments : Family Browser (UCSC)PITPNA
Phylogenetic Trees/Animal Genes : TreeFamPITPNA
Chemical/Protein Interactions : CTD5306
Chemical/Pharm GKB GenePA33335
Clinical trialPITPNA
Cancer Resource (Charite)ENSG00000174238
Ontology : AmiGOphospholipid binding  cytoplasm  lipid metabolic process  axon guidance  visual perception  phosphatidylcholine transporter activity  phosphatidylinositol transporter activity  
Ontology : EGO-EBIphospholipid binding  cytoplasm  lipid metabolic process  axon guidance  visual perception  phosphatidylcholine transporter activity  phosphatidylinositol transporter activity  
Other databases
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
PubGenePITPNA
iHOPPITPNA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:38:25 CEST 2013
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