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PITPNM2-AS1 (PITPNM2 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PITPNM2-AS1
LocusID (NCBI) 100507091
Atlas_Id 80142
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 123081384 and ends at 123084744 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PITPNM2-AS1   53391
Cards
Entrez_Gene (NCBI)PITPNM2-AS1  100507091  PITPNM2 antisense RNA 1
Aliases
GeneCards (Weizmann)PITPNM2-AS1
Ensembl hg19 (Hinxton)ENSG00000251497 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251497 [Gene_View]  chr12:123081384-123084744 [Contig_View]  PITPNM2-AS1 [Vega]
ICGC DataPortalENSG00000251497
TCGA cBioPortalPITPNM2-AS1
AceView (NCBI)PITPNM2-AS1
Genatlas (Paris)PITPNM2-AS1
WikiGenes100507091
SOURCE (Princeton)PITPNM2-AS1
Genetics Home Reference (NIH)PITPNM2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PITPNM2-AS1  -     chr12:123081384-123084744 +  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PITPNM2-AS1  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblPITPNM2-AS1 - 12q24.31 [CytoView hg19]  PITPNM2-AS1 - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIPITPNM2-AS1 [Mapview hg19]  PITPNM2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093493
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PITPNM2-AS1
Cluster EST : UnigeneHs.683912 [ NCBI ]
CGAP (NCI)Hs.683912
Alternative Splicing GalleryENSG00000251497
Gene ExpressionPITPNM2-AS1 [ NCBI-GEO ]   PITPNM2-AS1 [ EBI - ARRAY_EXPRESS ]   PITPNM2-AS1 [ SEEK ]   PITPNM2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PITPNM2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507091
GTEX Portal (Tissue expression)PITPNM2-AS1
Human Protein AtlasENSG00000251497-PITPNM2-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PITPNM2-AS1
DMDM Disease mutations100507091
Blocks (Seattle)PITPNM2-AS1
Human Protein Atlas [tissue]ENSG00000251497-PITPNM2-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000251497
BioGRIDPITPNM2-AS1
STRING (EMBL)PITPNM2-AS1
ZODIACPITPNM2-AS1
Ontologies - Pathways
Huge Navigator PITPNM2-AS1 [HugePedia]
snp3D : Map Gene to Disease100507091
BioCentury BCIQPITPNM2-AS1
ClinGenPITPNM2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507091
Clinical trialPITPNM2-AS1
Miscellaneous
canSAR (ICR)PITPNM2-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePITPNM2-AS1
EVEXPITPNM2-AS1
GoPubMedPITPNM2-AS1
iHOPPITPNM2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:27:12 CET 2017

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