Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PKD1P4-NPIPA8 (PKD1P4-NPIPA8 readthrough)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 110006323
Atlas_Id 80158
Location 16p13.11  [Link to chromosome band 16p13]
Location_base_pair Starts at 16316222 and ends at 16393972 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)PKD1P4-NPIPA8  110006323  PKD1P4-NPIPA8 readthrough
Aliases
GeneCards (Weizmann)PKD1P4-NPIPA8
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:16316222-16393972 [Contig_View]  PKD1P4-NPIPA8 [Vega]
TCGA cBioPortalPKD1P4-NPIPA8
AceView (NCBI)PKD1P4-NPIPA8
Genatlas (Paris)PKD1P4-NPIPA8
WikiGenes110006323
SOURCE (Princeton)PKD1P4-NPIPA8
Genetics Home Reference (NIH)PKD1P4-NPIPA8
Genomic and cartography
GoldenPath hg38 (UCSC)PKD1P4-NPIPA8  -     chr16:16316222-16393972 +  16p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PKD1P4-NPIPA8  -     16p13.11   [Description]    (hg19-Feb_2009)
EnsemblPKD1P4-NPIPA8 - 16p13.11 [CytoView hg19]  PKD1P4-NPIPA8 - 16p13.11 [CytoView hg38]
Mapping of homologs : NCBIPKD1P4-NPIPA8 [Mapview hg19]  PKD1P4-NPIPA8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CN279144 CN418452 DA101608 DA807698 DC423491
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PKD1P4-NPIPA8
Cluster EST : UnigeneHs.720303 [ NCBI ]
CGAP (NCI)Hs.720303
Gene ExpressionPKD1P4-NPIPA8 [ NCBI-GEO ]   PKD1P4-NPIPA8 [ EBI - ARRAY_EXPRESS ]   PKD1P4-NPIPA8 [ SEEK ]   PKD1P4-NPIPA8 [ MEM ]
Gene Expression Viewer (FireBrowse)PKD1P4-NPIPA8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)110006323
GTEX Portal (Tissue expression)PKD1P4-NPIPA8
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PKD1P4-NPIPA8
DMDM Disease mutations110006323
Blocks (Seattle)PKD1P4-NPIPA8
Protein Interaction databases
BioGRIDPKD1P4-NPIPA8
STRING (EMBL)PKD1P4-NPIPA8
ZODIACPKD1P4-NPIPA8
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease110006323
BioCentury BCIQPKD1P4-NPIPA8
ClinGenPKD1P4-NPIPA8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD110006323
Clinical trialPKD1P4-NPIPA8
Miscellaneous
canSAR (ICR)PKD1P4-NPIPA8 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePKD1P4-NPIPA8
EVEXPKD1P4-NPIPA8
GoPubMedPKD1P4-NPIPA8
iHOPPKD1P4-NPIPA8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:58:38 CET 2017

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