Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PKNOX2-AS1 (PKNOX2 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) PKNOX2-AS1
LocusID (NCBI) 103695364
Atlas_Id 71948
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 125028357 and ends at 125034505 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PKNOX2-AS1   50690
Cards
Entrez_Gene (NCBI)PKNOX2-AS1  103695364  PKNOX2 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)PKNOX2-AS1
Ensembl hg19 (Hinxton)ENSG00000254880 [Gene_View]  chr11:125028357-125034505 [Contig_View]  PKNOX2-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000254880 [Gene_View]  chr11:125028357-125034505 [Contig_View]  PKNOX2-AS1 [Vega]
ICGC DataPortalENSG00000254880
TCGA cBioPortalPKNOX2-AS1
AceView (NCBI)PKNOX2-AS1
Genatlas (Paris)PKNOX2-AS1
WikiGenes103695364
SOURCE (Princeton)PKNOX2-AS1
Genetics Home Reference (NIH)PKNOX2-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)PKNOX2-AS1  -     chr11:125028357-125034505 -  11q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PKNOX2-AS1  -     11q24.2   [Description]    (hg38-Dec_2013)
EnsemblPKNOX2-AS1 - 11q24.2 [CytoView hg19]  PKNOX2-AS1 - 11q24.2 [CytoView hg38]
Mapping of homologs : NCBIPKNOX2-AS1 [Mapview hg19]  PKNOX2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BP872841 HG504280
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)PKNOX2-AS1
Cluster EST : UnigeneHs.576940 [ NCBI ]
CGAP (NCI)Hs.576940
Alternative Splicing GalleryENSG00000254880
Gene ExpressionPKNOX2-AS1 [ NCBI-GEO ]   PKNOX2-AS1 [ EBI - ARRAY_EXPRESS ]   PKNOX2-AS1 [ SEEK ]   PKNOX2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PKNOX2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103695364
GTEX Portal (Tissue expression)PKNOX2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PKNOX2-AS1
DMDM Disease mutations103695364
Blocks (Seattle)PKNOX2-AS1
Human Protein AtlasENSG00000254880
Protein Interaction databases
FunCoupENSG00000254880
BioGRIDPKNOX2-AS1
STRING (EMBL)PKNOX2-AS1
ZODIACPKNOX2-AS1
Ontologies - Pathways
Huge Navigator PKNOX2-AS1 [HugePedia]
snp3D : Map Gene to Disease103695364
BioCentury BCIQPKNOX2-AS1
ClinGenPKNOX2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103695364
Clinical trialPKNOX2-AS1
Miscellaneous
canSAR (ICR)PKNOX2-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePKNOX2-AS1
EVEXPKNOX2-AS1
GoPubMedPKNOX2-AS1
iHOPPKNOX2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:38:46 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.