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PLA2G12AP1 (phospholipase A2 group XIIA pseudogene 1)

Identity

Other alias-
HGNC (Hugo) PLA2G12AP1
LocusID (NCBI) 100420258
Atlas_Id 78659
Location 1p32.3  [Link to chromosome band 1p32]
Location_base_pair Starts at 52368520 and ends at 52370267 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PLA2G12AP1   39248
Cards
Entrez_Gene (NCBI)PLA2G12AP1  100420258  phospholipase A2 group XIIA pseudogene 1
Aliases
GeneCards (Weizmann)PLA2G12AP1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:52368520-52370267 [Contig_View]  PLA2G12AP1 [Vega]
TCGA cBioPortalPLA2G12AP1
AceView (NCBI)PLA2G12AP1
Genatlas (Paris)PLA2G12AP1
WikiGenes100420258
SOURCE (Princeton)PLA2G12AP1
Genetics Home Reference (NIH)PLA2G12AP1
Genomic and cartography
GoldenPath hg38 (UCSC)PLA2G12AP1  -     chr1:52368520-52370267 +  1p32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLA2G12AP1  -     1p32.3   [Description]    (hg19-Feb_2009)
EnsemblPLA2G12AP1 - 1p32.3 [CytoView hg19]  PLA2G12AP1 - 1p32.3 [CytoView hg38]
Mapping of homologs : NCBIPLA2G12AP1 [Mapview hg19]  PLA2G12AP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC057844
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PLA2G12AP1
Cluster EST : UnigeneHs.571871 [ NCBI ]
CGAP (NCI)Hs.571871
Gene ExpressionPLA2G12AP1 [ NCBI-GEO ]   PLA2G12AP1 [ EBI - ARRAY_EXPRESS ]   PLA2G12AP1 [ SEEK ]   PLA2G12AP1 [ MEM ]
Gene Expression Viewer (FireBrowse)PLA2G12AP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100420258
GTEX Portal (Tissue expression)PLA2G12AP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLA2G12AP1
DMDM Disease mutations100420258
Blocks (Seattle)PLA2G12AP1
Protein Interaction databases
BioGRIDPLA2G12AP1
STRING (EMBL)PLA2G12AP1
ZODIACPLA2G12AP1
Ontologies - Pathways
Huge Navigator PLA2G12AP1 [HugePedia]
snp3D : Map Gene to Disease100420258
BioCentury BCIQPLA2G12AP1
ClinGenPLA2G12AP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100420258
Clinical trialPLA2G12AP1
Miscellaneous
canSAR (ICR)PLA2G12AP1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLA2G12AP1
EVEXPLA2G12AP1
GoPubMedPLA2G12AP1
iHOPPLA2G12AP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:22 CET 2017

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