Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PLAC9P1 (placenta specific 9 pseudogene 1)

Identity

Other alias-
HGNC (Hugo) PLAC9P1
LocusID (NCBI) 389033
Atlas_Id 80005
Location 2q21.1  [Link to chromosome band 2q21]
Location_base_pair Starts at 129922862 and ends at 129934317 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PLAC9P1   52678
Cards
Entrez_Gene (NCBI)PLAC9P1  389033  placenta specific 9 pseudogene 1
Aliases
GeneCards (Weizmann)PLAC9P1
Ensembl hg19 (Hinxton)ENSG00000214100 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214100 [Gene_View]  chr2:129922862-129934317 [Contig_View]  PLAC9P1 [Vega]
ICGC DataPortalENSG00000214100
TCGA cBioPortalPLAC9P1
AceView (NCBI)PLAC9P1
Genatlas (Paris)PLAC9P1
WikiGenes389033
SOURCE (Princeton)PLAC9P1
Genetics Home Reference (NIH)PLAC9P1
Genomic and cartography
GoldenPath hg38 (UCSC)PLAC9P1  -     chr2:129922862-129934317 -  2q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLAC9P1  -     2q21.1   [Description]    (hg19-Feb_2009)
EnsemblPLAC9P1 - 2q21.1 [CytoView hg19]  PLAC9P1 - 2q21.1 [CytoView hg38]
Mapping of homologs : NCBIPLAC9P1 [Mapview hg19]  PLAC9P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI161103 BF592795
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PLAC9P1
Cluster EST : UnigeneHs.380682 [ NCBI ]
CGAP (NCI)Hs.380682
Alternative Splicing GalleryENSG00000214100
Gene ExpressionPLAC9P1 [ NCBI-GEO ]   PLAC9P1 [ EBI - ARRAY_EXPRESS ]   PLAC9P1 [ SEEK ]   PLAC9P1 [ MEM ]
Gene Expression Viewer (FireBrowse)PLAC9P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)389033
GTEX Portal (Tissue expression)PLAC9P1
Human Protein AtlasENSG00000214100-PLAC9P1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLAC9P1
DMDM Disease mutations389033
Blocks (Seattle)PLAC9P1
Human Protein Atlas [tissue]ENSG00000214100-PLAC9P1 [tissue]
IPIIPI00874251   
Protein Interaction databases
FunCoupENSG00000214100
BioGRIDPLAC9P1
STRING (EMBL)PLAC9P1
ZODIACPLAC9P1
Ontologies - Pathways
Huge Navigator PLAC9P1 [HugePedia]
snp3D : Map Gene to Disease389033
BioCentury BCIQPLAC9P1
ClinGenPLAC9P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389033
Clinical trialPLAC9P1
Miscellaneous
canSAR (ICR)PLAC9P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLAC9P1
EVEXPLAC9P1
GoPubMedPLAC9P1
iHOPPLAC9P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:07:22 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.