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PLAT (plasminogen activator, tissue type)

Identity

Alias (NCBI)T-PA
TPA
HGNC (Hugo) PLAT
HGNC Previous nameplasminogen activator, tissue
LocusID (NCBI) 5327
Atlas_Id 41739
Location 8p11.21  [Link to chromosome band 8p11]
Location_base_pair Starts at 42174718 and ends at 42207565 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AUP1 (2p13.1) / PLAT (8p11.21)CCNJL (5q33.3) / PLAT (8p11.21)ODF2 (9q34.11) / PLAT (8p11.21)
PLAT (8p11.21) / C12orf66 (12q14.2)PLAT 8p11.21 / C12orf66 12q14.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PLAT   9051
LRG (Locus Reference Genomic)LRG_570
Cards
Entrez_Gene (NCBI)PLAT    plasminogen activator, tissue type
AliasesT-PA; TPA
GeneCards (Weizmann)PLAT
Ensembl hg19 (Hinxton)ENSG00000104368 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104368 [Gene_View]  ENSG00000104368 [Sequence]  chr8:42174718-42207565 [Contig_View]  PLAT [Vega]
ICGC DataPortalENSG00000104368
TCGA cBioPortalPLAT
AceView (NCBI)PLAT
Genatlas (Paris)PLAT
SOURCE (Princeton)PLAT
Genetics Home Reference (NIH)PLAT
Genomic and cartography
GoldenPath hg38 (UCSC)PLAT  -     chr8:42174718-42207565 -  8p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLAT  -     8p11.21   [Description]    (hg19-Feb_2009)
GoldenPathPLAT - 8p11.21 [CytoView hg19]  PLAT - 8p11.21 [CytoView hg38]
ImmunoBaseENSG00000104368
Genome Data Viewer NCBIPLAT [Mapview hg19]  
OMIM173370   612348   
Gene and transcription
Genbank (Entrez)A03776 A07197 AF260825 AF282882 AK289387
RefSeq transcript (Entrez)NM_000930 NM_000931 NM_001319189 NM_033011
Consensus coding sequences : CCDS (NCBI)PLAT
Gene ExpressionPLAT [ NCBI-GEO ]   PLAT [ EBI - ARRAY_EXPRESS ]   PLAT [ SEEK ]   PLAT [ MEM ]
Gene Expression Viewer (FireBrowse)PLAT [ Firebrowse - Broad ]
GenevisibleExpression of PLAT in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5327
GTEX Portal (Tissue expression)PLAT
Human Protein AtlasENSG00000104368-PLAT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLAT
Human Protein Atlas [tissue]ENSG00000104368-PLAT [tissue]
HPRD01419
Protein Interaction databases
BioGRIDPLAT
STRING (EMBL)PLAT
ZODIACPLAT
Ontologies - Pathways
Litterature
PubMed372 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPLAT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:25:35 CEST 2021

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