PLCL2 (phospholipase C-like 2)

Identity

Other names	FLJ13484
	KIAA1092
	PLCE2
HGNC	PLCL2
Location	3p25.3-p25.1
Location_base_pair	Starts at 16901673 and ends at 17107102 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PLCL2   9064
Entrez_Gene	PLCL2  23228  phospholipase C-like 2
	Cards
GeneCards	PLCL2
Ensembl	ENSG00000154822 [Gene_View]  PLCL2 [Vega]
Genatlas	PLCL2
	Genomic and cartography
GoldenPath	PLCL2  -     chr3:16901673-17107102 +  3p24.3   [Description]    (hg18-March_2006)
Ensembl	PLCL2 - 3p24.3 [CytoView]
NCBI	Mapview
HomoloGene	PLCL2
	Gene and transcription
Genbank	AB029015 [ ENTREZ ]
Genbank	AK023546 [ ENTREZ ]
Genbank	AK291419 [ ENTREZ ]
Genbank	AL117515 [ ENTREZ ]
Genbank	BC036392 [ ENTREZ ]
RefSeq	NM_015184 [ SRS ]    NM_015184 [ ENTREZ ]
RefSeq	AC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeq	AC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeq	NC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeq	NT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeq	NW_001838877 [ SRS ]    NW_001838877 [ ENTREZ ]
RefSeq	NW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
CCDS	PLCL2 CCDS - NCBI
AceView	PLCL2 AceView - NCBI
Unigene	Hs.202010 [ SRS ]    Hs.202010 [ NCBI ]
Fast-db	2834 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9UPR0 [ SRS]    Q9UPR0 [ EXPASY ]     Q9UPR0 [ INTERPRO ]     Q9UPR0 [ UNIPROT ] Q9UPR0 [ VarSplice FASTA ]
Prosite	PS50004 C2 [ SRS ]    PS50004 C2 [ Expasy ]
Prosite	PS50003 PH_DOMAIN [ SRS ]    PS50003 PH_DOMAIN [ Expasy ]
Prosite	PS50007 PIPLC_X_DOMAIN [ SRS ]    PS50007 PIPLC_X_DOMAIN [ Expasy ]
Prosite	PS50008 PIPLC_Y_DOMAIN [ SRS ]    PS50008 PIPLC_Y_DOMAIN [ Expasy ]
Interpro	IPR000008 C2_Ca-dep [ SRS ]    IPR000008 C2_Ca-dep [ EBI ]
Interpro	IPR011992 EF-Hand_type [ SRS ]    IPR011992 EF-Hand_type [ EBI ]
Interpro	IPR001849 PH [ SRS ]    IPR001849 PH [ EBI ]
Interpro	IPR011993 PH_type [ SRS ]    IPR011993 PH_type [ EBI ]
Interpro	IPR015359 Phospholipase_C_EF-hand-like [ SRS ]    IPR015359 Phospholipase_C_EF-hand-like [ EBI ]
Interpro	IPR001192 Phospholipase_C_Pinositol-sp_C [ SRS ]    IPR001192 Phospholipase_C_Pinositol-sp_C [ EBI ]
Interpro	IPR000909 Phospholipase_C_Pinositol-sp_X [ SRS ]    IPR000909 Phospholipase_C_Pinositol-sp_X [ EBI ]
Interpro	IPR001711 Phospholipase_C_Pinositol-sp_Y [ SRS ]    IPR001711 Phospholipase_C_Pinositol-sp_Y [ EBI ]
CluSTr	Q9UPR0
Pfam	PF00168 C2 [ SRS ]    PF00168 C2 [ Sanger ]    pfam00168 [ NCBI-CDD ]
Pfam	PF09279 efhand_like [ SRS ]    PF09279 efhand_like [ Sanger ]    pfam09279 [ NCBI-CDD ]
Pfam	PF00169 PH [ SRS ]    PF00169 PH [ Sanger ]    pfam00169 [ NCBI-CDD ]
Pfam	PF00388 PI-PLC-X [ SRS ]    PF00388 PI-PLC-X [ Sanger ]    pfam00388 [ NCBI-CDD ]
Pfam	PF00387 PI-PLC-Y [ SRS ]    PF00387 PI-PLC-Y [ Sanger ]    pfam00387 [ NCBI-CDD ]
Smart	SM00239 C2 [EMBL]
Smart	SM00233 PH [EMBL]
Smart	SM00148 PLCXc [EMBL]
Smart	SM00149 PLCYc [EMBL]
Prodom	PD001202 PI_PLC_Y[INRA-Toulouse]
Prodom	Q9UPR0 PLCL2_HUMAN [ Domain structure ]   Q9UPR0 PLCL2_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q9UPR0
HPRD	07147
	Protein Interaction databases
DIP	Q9UPR0
IntAct	Q9UPR0
	Polymorphism : SNP, mutations, diseases
SNP	PLCL2 [dbSNP-NCBI]
SNP	NM_015184 [SNP-NCI]
SNP	PLCL2 [GeneSNPs - Utah]  PLCL2] [HGBASE - SRS]
HAPMAP	PLCL2 [HAPMAP]
COSMIC	PLCL2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	PLCL2
Genetic Association	PLCL2
CDC HuGE	PLCL2
	General knowledge
Family Browser	PLCL2 [UCSC Family Browser]
SOURCE	NM_015184
SMD	Hs.202010
SAGE	Hs.202010
GO	phosphoinositide phospholipase C activity [Amigo]  phosphoinositide phospholipase C activity
GO	signal transducer activity [Amigo]  signal transducer activity
GO	calcium ion binding [Amigo]  calcium ion binding
GO	cytoplasm [Amigo]  cytoplasm
GO	lipid metabolic process [Amigo]  lipid metabolic process
GO	intracellular signaling cascade [Amigo]  intracellular signaling cascade
PubGene	PLCL2
TreeFam	PLCL2
CTD	23228 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PLCL2 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Nov 27 14:04:06 2008