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PLCXD2 (phosphatidylinositol-specific phospholipase C, X domain containing 2)

Identity

Other names-
HGNC (Hugo) PLCXD2
LocusID (NCBI) 257068
Location 3q13.2
Location_base_pair Starts at 111393523 and ends at 111565294 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)PLCXD2   26462
Entrez_Gene (NCBI)PLCXD2  257068  phosphatidylinositol-specific phospholipase C, X domain containing 2
Cards
GeneCards (Weizmann)PLCXD2
Ensembl (Hinxton)ENSG00000240891 [Gene_View]  chr3:111393523-111565294 [Contig_View]  PLCXD2 [Vega]
AceView (NCBI)PLCXD2
Genatlas (Paris)PLCXD2
SOURCE (Stanford)NM_001134478 NM_001185106 NM_153268
Genomic and cartography
GoldenPath (UCSC)PLCXD2  -  3q13.2   chr3:111393523-111565294 +  3q13.2   [Description]    (hg19-Feb_2009)
EnsemblPLCXD2 - 3q13.2 [CytoView]
Mapping of homologs : NCBIPLCXD2 [Mapview]
Gene and transcription
Genbank (Entrez)AK056141 AK091636 AK095647 AK095735 AL712245
RefSeq transcript (SRS)NM_001134478 NM_001185106 NM_153268
RefSeq transcript (Entrez)NM_001134478 NM_001185106 NM_153268
RefSeq genomic (SRS)AC_000135 NC_000003 NC_018914 NT_005612 NW_001838881 NW_004078013
RefSeq genomic (Entrez)AC_000135 NC_000003 NC_018914 NT_005612 NW_001838881 NW_004078013
Consensus coding sequences : CCDS (NCBI)PLCXD2
Cluster EST : UnigeneHs.603252 [ SRS ] Hs.603252 [ NCBI ]
CGAP (NCI)Hs.603252
Alternative Splicing : Fast-db (Paris)GSHG0021033
Alternative Splicing GalleryENSG00000240891
Gene ExpressionPLCXD2 [ NCBI-GEO ]   PLCXD2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0VAA5 (SRS) Q0VAA5 (Uniprot)
NextProtQ0VAA5
With graphics : InterProQ0VAA5
Splice isoforms : SwissVarQ0VAA5(Swissvar)
Domaine pattern : Prosite (SRS)PIPLC_X_DOMAIN (PS50007)   
Domaine pattern : Prosite (Expaxy)PIPLC_X_DOMAIN (PS50007)   
Domains : Interpro (SRS)PLC-like_Pdiesterase_TIM-brl    PLipase_C_PInositol-sp_X_dom   
Domains : Interpro (EBI)PLC-like_Pdiesterase_TIM-brl    PLipase_C_PInositol-sp_X_dom   
Related proteins : CluSTrQ0VAA5
Domain families : Pfam (SRS)PI-PLC-X (PF00388)   
Domain families : Pfam (Sanger)PI-PLC-X (PF00388)   
Domain families : Pfam (NCBI)pfam00388   
DMDM257068
Blocks (Seattle)Q0VAA5
Human Protein AtlasENSG00000240891
HPRD07114
IPIIPI00910529   IPI00867633   IPI00945467   
Protein Interaction databases
DIP (DOE-UCLA)Q0VAA5
IntAct (EBI)Q0VAA5
FunCoupENSG00000240891
REACTOMEPLCXD2
Protein Interaction Database257068
BioGRIDPLCXD2
InParanoidQ0VAA5
Interologous Interaction database Q0VAA5
IntegromeDBPLCXD2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)PLCXD2
SNP (GeneSNP Utah)PLCXD2
SNP : HGBasePLCXD2
Genetic variants : HAPMAPPLCXD2
Somatic Mutations in Cancer : COSMICPLCXD2 
CONAN: Copy Number AnalysisPLCXD2 
Mutations and Diseases : HGMDPLCXD2
OMIM
GENETests
Disease Genetic AssociationPLCXD2
Huge Navigator PLCXD2 [HugePedia]  PLCXD2 [HugeCancerGEM]
Genomic VariantsPLCXD2  PLCXD2 [DGVbeta]
ClinVarPLCXD2
snp3D : Map Gene to Disease257068
General knowledge
Homologs : HomoloGenePLCXD2
Homology/Alignments : Family Browser (UCSC)PLCXD2
Phylogenetic Trees/Animal Genes : TreeFamPLCXD2
Chemical/Protein Interactions : CTD257068
Chemical/Pharm GKB GenePA134928848
Clinical trialPLCXD2
Cancer Resource (Charite)ENSG00000240891
Ontology : AmiGOsignal transducer activity  phosphoric diester hydrolase activity  lipid catabolic process  
Ontology : EGO-EBIsignal transducer activity  phosphoric diester hydrolase activity  lipid catabolic process  
Other databases
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
PubGenePLCXD2
iHOPPLCXD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:28:27 CEST 2013
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