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PLEKHA8P1 (pleckstrin homology domain containing A8 pseudogene 1)

Identity

Alias_namesPLEKHA9
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 9
pleckstrin homology domain containing, family A member 8 pseudogene 1
Alias_symbol (synonym)FLJ14156
Other alias
HGNC (Hugo) PLEKHA8P1
LocusID (NCBI) 51054
Atlas_Id 47012
Location 12q12  [Link to chromosome band 12q12]
Location_base_pair Starts at 45173064 and ends at 45216006 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PLEKHA8P1   30222
Cards
Entrez_Gene (NCBI)PLEKHA8P1  51054  pleckstrin homology domain containing A8 pseudogene 1
AliasesPLEKHA9
GeneCards (Weizmann)PLEKHA8P1
Ensembl hg19 (Hinxton)ENSG00000134297 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134297 [Gene_View]  chr12:45173064-45216006 [Contig_View]  PLEKHA8P1 [Vega]
ICGC DataPortalENSG00000134297
TCGA cBioPortalPLEKHA8P1
AceView (NCBI)PLEKHA8P1
Genatlas (Paris)PLEKHA8P1
WikiGenes51054
SOURCE (Princeton)PLEKHA8P1
Genetics Home Reference (NIH)PLEKHA8P1
Genomic and cartography
GoldenPath hg38 (UCSC)PLEKHA8P1  -     chr12:45173064-45216006 -  12q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLEKHA8P1  -     12q12   [Description]    (hg19-Feb_2009)
EnsemblPLEKHA8P1 - 12q12 [CytoView hg19]  PLEKHA8P1 - 12q12 [CytoView hg38]
Mapping of homologs : NCBIPLEKHA8P1 [Mapview hg19]  PLEKHA8P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF103731 AF380162 AK024218 BC028914 BC063575
RefSeq transcript (Entrez)NM_015899
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PLEKHA8P1
Cluster EST : UnigeneHs.558495 [ NCBI ]
CGAP (NCI)Hs.558495
Alternative Splicing GalleryENSG00000134297
Gene ExpressionPLEKHA8P1 [ NCBI-GEO ]   PLEKHA8P1 [ EBI - ARRAY_EXPRESS ]   PLEKHA8P1 [ SEEK ]   PLEKHA8P1 [ MEM ]
Gene Expression Viewer (FireBrowse)PLEKHA8P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51054
GTEX Portal (Tissue expression)PLEKHA8P1
Human Protein AtlasENSG00000134297-PLEKHA8P1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95397   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95397  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95397
Splice isoforms : SwissVarO95397
PhosPhoSitePlusO95397
Domains : Interpro (EBI)Glycolipid_transfer_prot_dom   
Domain families : Pfam (Sanger)GLTP (PF08718)   
Domain families : Pfam (NCBI)pfam08718   
Conserved Domain (NCBI)PLEKHA8P1
DMDM Disease mutations51054
Blocks (Seattle)PLEKHA8P1
SuperfamilyO95397
Human Protein Atlas [tissue]ENSG00000134297-PLEKHA8P1 [tissue]
Peptide AtlasO95397
HPRD15143
IPIIPI00143878   IPI00917899   
Protein Interaction databases
DIP (DOE-UCLA)O95397
IntAct (EBI)O95397
FunCoupENSG00000134297
BioGRIDPLEKHA8P1
STRING (EMBL)PLEKHA8P1
ZODIACPLEKHA8P1
Ontologies - Pathways
QuickGOO95397
Ontology : AmiGOcytoplasm  glycolipid transporter activity  glycolipid transport  glycolipid binding  
Ontology : EGO-EBIcytoplasm  glycolipid transporter activity  glycolipid transport  glycolipid binding  
NDEx NetworkPLEKHA8P1
Atlas of Cancer Signalling NetworkPLEKHA8P1
Wikipedia pathwaysPLEKHA8P1
Orthology - Evolution
OrthoDB51054
GeneTree (enSembl)ENSG00000134297
Phylogenetic Trees/Animal Genes : TreeFamPLEKHA8P1
HOVERGENO95397
HOGENOMO95397
Homologs : HomoloGenePLEKHA8P1
Homology/Alignments : Family Browser (UCSC)PLEKHA8P1
Gene fusions - Rearrangements
Tumor Fusion PortalPLEKHA8P1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPLEKHA8P1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PLEKHA8P1
dbVarPLEKHA8P1
ClinVarPLEKHA8P1
1000_GenomesPLEKHA8P1 
Exome Variant ServerPLEKHA8P1
ExAC (Exome Aggregation Consortium)ENSG00000134297
GNOMAD BrowserENSG00000134297
Genetic variants : HAPMAP51054
Genomic Variants (DGV)PLEKHA8P1 [DGVbeta]
DECIPHERPLEKHA8P1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPLEKHA8P1 
Mutations
ICGC Data PortalPLEKHA8P1 
TCGA Data PortalPLEKHA8P1 
Broad Tumor PortalPLEKHA8P1
OASIS PortalPLEKHA8P1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPLEKHA8P1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPLEKHA8P1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PLEKHA8P1
DgiDB (Drug Gene Interaction Database)PLEKHA8P1
DoCM (Curated mutations)PLEKHA8P1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PLEKHA8P1 (select a term)
intoGenPLEKHA8P1
Cancer3DPLEKHA8P1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPLEKHA8P1
MedgenPLEKHA8P1
Genetic Testing Registry PLEKHA8P1
NextProtO95397 [Medical]
TSGene51054
GENETestsPLEKHA8P1
Target ValidationPLEKHA8P1
Huge Navigator PLEKHA8P1 [HugePedia]
snp3D : Map Gene to Disease51054
BioCentury BCIQPLEKHA8P1
ClinGenPLEKHA8P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51054
Chemical/Pharm GKB GenePA134868961
Clinical trialPLEKHA8P1
Miscellaneous
canSAR (ICR)PLEKHA8P1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLEKHA8P1
EVEXPLEKHA8P1
GoPubMedPLEKHA8P1
iHOPPLEKHA8P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:29:09 CET 2017

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