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PLEKHG5 (pleckstrin homology and RhoGEF domain containing G5)

Identity

Alias (NCBI)CMTRIC
DSMA4
GEF720
Syx
Tech
HGNC (Hugo) PLEKHG5
HGNC Alias symbKIAA0720
Syx
GEF720
Tech
HGNC Alias namesynectin-binding guanine exchange factor
HGNC Previous namepleckstrin homology domain containing, family G (with RhoGef domain) member 5
LocusID (NCBI) 57449
Atlas_Id 58298
Location 1p36.31  [Link to chromosome band 1p36]
Location_base_pair Starts at 6466092 and ends at 6520061 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CLSTN1 (1p36.22) / PLEKHG5 (1p36.31)PLEKHG5 (1p36.31) / TNFRSF8 (1p36.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PLEKHG5   29105
Cards
Entrez_Gene (NCBI)PLEKHG5    pleckstrin homology and RhoGEF domain containing G5
AliasesCMTRIC; DSMA4; GEF720; Syx; 
Tech
GeneCards (Weizmann)PLEKHG5
Ensembl hg19 (Hinxton)ENSG00000171680 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171680 [Gene_View]  ENSG00000171680 [Sequence]  chr1:6466092-6520061 [Contig_View]  PLEKHG5 [Vega]
ICGC DataPortalENSG00000171680
TCGA cBioPortalPLEKHG5
AceView (NCBI)PLEKHG5
Genatlas (Paris)PLEKHG5
SOURCE (Princeton)PLEKHG5
Genetics Home Reference (NIH)PLEKHG5
Genomic and cartography
GoldenPath hg38 (UCSC)PLEKHG5  -     chr1:6466092-6520061 -  1p36.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLEKHG5  -     1p36.31   [Description]    (hg19-Feb_2009)
GoldenPathPLEKHG5 - 1p36.31 [CytoView hg19]  PLEKHG5 - 1p36.31 [CytoView hg38]
ImmunoBaseENSG00000171680
Genome Data Viewer NCBIPLEKHG5 [Mapview hg19]  
OMIM611067   611101   615376   
Gene and transcription
Genbank (Entrez)AB018263 AB097001 AK024676 AK091201 AK096347
RefSeq transcript (Entrez)NM_001042663 NM_001042664 NM_001042665 NM_001265592 NM_001265593 NM_001265594 NM_020631 NM_198681
Consensus coding sequences : CCDS (NCBI)PLEKHG5
Gene ExpressionPLEKHG5 [ NCBI-GEO ]   PLEKHG5 [ EBI - ARRAY_EXPRESS ]   PLEKHG5 [ SEEK ]   PLEKHG5 [ MEM ]
Gene Expression Viewer (FireBrowse)PLEKHG5 [ Firebrowse - Broad ]
GenevisibleExpression of PLEKHG5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57449
GTEX Portal (Tissue expression)PLEKHG5
Human Protein AtlasENSG00000171680-PLEKHG5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLEKHG5
Human Protein Atlas [tissue]ENSG00000171680-PLEKHG5 [tissue]
Protein Interaction databases
BioGRIDPLEKHG5
STRING (EMBL)PLEKHG5
ZODIACPLEKHG5
Ontologies - Pathways
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPLEKHG5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:25:42 CEST 2021

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