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PLEKHM1P1 (pleckstrin homology and RUN domain containing M1 pseudogene 1)

Identity

Alias_namesPLEKHM1P
pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene
Alias_symbol (synonym)LOC440456
Other alias
HGNC (Hugo) PLEKHM1P1
LocusID (NCBI) 440456
Atlas_Id 77947
Location 17q24.1  [Link to chromosome band 17q24]
Location_base_pair Starts at 64784841 and ends at 64837184 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PLEKHM1P1 (17q24.1) / KIAA1671 (22q11.23)PLEKHM1P1 (17q24.1) / POLN (4p16.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PLEKHM1P1   35411
Cards
Entrez_Gene (NCBI)PLEKHM1P1  440456  pleckstrin homology and RUN domain containing M1 pseudogene 1
AliasesPLEKHM1P
GeneCards (Weizmann)PLEKHM1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:64784841-64837184 [Contig_View]  PLEKHM1P1 [Vega]
TCGA cBioPortalPLEKHM1P1
AceView (NCBI)PLEKHM1P1
Genatlas (Paris)PLEKHM1P1
WikiGenes440456
SOURCE (Princeton)PLEKHM1P1
Genetics Home Reference (NIH)PLEKHM1P1
Genomic and cartography
GoldenPath hg38 (UCSC)PLEKHM1P1  -     chr17:64784841-64837184 -  17q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLEKHM1P1  -     17q24.1   [Description]    (hg19-Feb_2009)
EnsemblPLEKHM1P1 - 17q24.1 [CytoView hg19]  PLEKHM1P1 - 17q24.1 [CytoView hg38]
Mapping of homologs : NCBIPLEKHM1P1 [Mapview hg19]  PLEKHM1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK301174 AK303621 AK304173 AK308180 AL833315
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PLEKHM1P1
Cluster EST : UnigeneHs.646585 [ NCBI ]
CGAP (NCI)Hs.646585
Gene ExpressionPLEKHM1P1 [ NCBI-GEO ]   PLEKHM1P1 [ EBI - ARRAY_EXPRESS ]   PLEKHM1P1 [ SEEK ]   PLEKHM1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)PLEKHM1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440456
GTEX Portal (Tissue expression)PLEKHM1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLEKHM1P1
DMDM Disease mutations440456
Blocks (Seattle)PLEKHM1P1
IPIIPI00740891   
Protein Interaction databases
BioGRIDPLEKHM1P1
STRING (EMBL)PLEKHM1P1
ZODIACPLEKHM1P1
Ontologies - Pathways
Huge Navigator PLEKHM1P1 [HugePedia]
snp3D : Map Gene to Disease440456
BioCentury BCIQPLEKHM1P1
ClinGenPLEKHM1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440456
Chemical/Pharm GKB GenePA164724626
Clinical trialPLEKHM1P1
Miscellaneous
canSAR (ICR)PLEKHM1P1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLEKHM1P1
EVEXPLEKHM1P1
GoPubMedPLEKHM1P1
iHOPPLEKHM1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:36:33 CET 2017

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