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PLIN2 (perilipin 2)

Identity

Alias_namesADFP
adipose differentiation-related protein
Alias_symbol (synonym)ADRP
Other alias
HGNC (Hugo) PLIN2
LocusID (NCBI) 123
Atlas_Id 51097
Location 9p22.1  [Link to chromosome band 9p22]
Location_base_pair Starts at 19115761 and ends at 19127606 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GSTO1 (10q25.1) / PLIN2 (9p22.1)HAUS6 (9p22.1) / PLIN2 (9p22.1)MPDZ (9p23) / PLIN2 (9p22.1)
PLIN2 (9p22.1) / CA10 (17q21.33)SQSTM1 (5q35.3) / PLIN2 (9p22.1)HAUS6 9p22.1 / PLIN2 9p22.1
MPDZ 9p23 / PLIN2 9p22.1PLIN2 9p22.1 / CA10 17q21.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PLIN2   248
Cards
Entrez_Gene (NCBI)PLIN2  123  perilipin 2
AliasesADFP; ADRP
GeneCards (Weizmann)PLIN2
Ensembl hg19 (Hinxton)ENSG00000147872 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000147872 [Gene_View]  chr9:19115761-19127606 [Contig_View]  PLIN2 [Vega]
ICGC DataPortalENSG00000147872
TCGA cBioPortalPLIN2
AceView (NCBI)PLIN2
Genatlas (Paris)PLIN2
WikiGenes123
SOURCE (Princeton)PLIN2
Genetics Home Reference (NIH)PLIN2
Genomic and cartography
GoldenPath hg38 (UCSC)PLIN2  -     chr9:19115761-19127606 -  9p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLIN2  -     9p22.1   [Description]    (hg19-Feb_2009)
EnsemblPLIN2 - 9p22.1 [CytoView hg19]  PLIN2 - 9p22.1 [CytoView hg38]
Mapping of homologs : NCBIPLIN2 [Mapview hg19]  PLIN2 [Mapview hg38]
OMIM103195   
Gene and transcription
Genbank (Entrez)AF443203 AK296125 AK297920 AK312983 BC005127
RefSeq transcript (Entrez)NM_001122
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PLIN2
Cluster EST : UnigeneHs.3416 [ NCBI ]
CGAP (NCI)Hs.3416
Alternative Splicing GalleryENSG00000147872
Gene ExpressionPLIN2 [ NCBI-GEO ]   PLIN2 [ EBI - ARRAY_EXPRESS ]   PLIN2 [ SEEK ]   PLIN2 [ MEM ]
Gene Expression Viewer (FireBrowse)PLIN2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)123
GTEX Portal (Tissue expression)PLIN2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99541   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ99541  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ99541
Splice isoforms : SwissVarQ99541
PhosPhoSitePlusQ99541
Domains : Interpro (EBI)Perilipin   
Domain families : Pfam (Sanger)Perilipin (PF03036)   
Domain families : Pfam (NCBI)pfam03036   
Conserved Domain (NCBI)PLIN2
DMDM Disease mutations123
Blocks (Seattle)PLIN2
SuperfamilyQ99541
Human Protein AtlasENSG00000147872
Peptide AtlasQ99541
HPRD00057
IPIIPI00293307   IPI00643517   IPI00514709   IPI00646360   
Protein Interaction databases
DIP (DOE-UCLA)Q99541
IntAct (EBI)Q99541
FunCoupENSG00000147872
BioGRIDPLIN2
STRING (EMBL)PLIN2
ZODIACPLIN2
Ontologies - Pathways
QuickGOQ99541
Ontology : AmiGOextracellular region  nucleus  endoplasmic reticulum  lipid particle  cytosol  plasma membrane  response to organic cyclic compound  long-chain fatty acid transport  lipid storage  response to drug  
Ontology : EGO-EBIextracellular region  nucleus  endoplasmic reticulum  lipid particle  cytosol  plasma membrane  response to organic cyclic compound  long-chain fatty acid transport  lipid storage  response to drug  
NDEx NetworkPLIN2
Atlas of Cancer Signalling NetworkPLIN2
Wikipedia pathwaysPLIN2
Orthology - Evolution
OrthoDB123
GeneTree (enSembl)ENSG00000147872
Phylogenetic Trees/Animal Genes : TreeFamPLIN2
HOVERGENQ99541
HOGENOMQ99541
Homologs : HomoloGenePLIN2
Homology/Alignments : Family Browser (UCSC)PLIN2
Gene fusions - Rearrangements
Fusion : MitelmanHAUS6/PLIN2 [9p22.1/9p22.1]  [t(9;9)(p22;p22)]  
Fusion : MitelmanMPDZ/PLIN2 [9p23/9p22.1]  [t(9;9)(p22;p23)]  
Fusion : MitelmanPLIN2/CA10 [9p22.1/17q21.33]  [t(9;17)(p22;q22)]  
Fusion: TCGAHAUS6 9p22.1 PLIN2 9p22.1 KIRC
Fusion: TCGAMPDZ 9p23 PLIN2 9p22.1 BRCA
Fusion: TCGAPLIN2 9p22.1 CA10 17q21.33 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPLIN2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PLIN2
dbVarPLIN2
ClinVarPLIN2
1000_GenomesPLIN2 
Exome Variant ServerPLIN2
ExAC (Exome Aggregation Consortium)PLIN2 (select the gene name)
Genetic variants : HAPMAP123
Genomic Variants (DGV)PLIN2 [DGVbeta]
DECIPHERPLIN2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPLIN2 
Mutations
ICGC Data PortalPLIN2 
TCGA Data PortalPLIN2 
Broad Tumor PortalPLIN2
OASIS PortalPLIN2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPLIN2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPLIN2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PLIN2
DgiDB (Drug Gene Interaction Database)PLIN2
DoCM (Curated mutations)PLIN2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PLIN2 (select a term)
intoGenPLIN2
Cancer3DPLIN2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM103195   
Orphanet
MedgenPLIN2
Genetic Testing Registry PLIN2
NextProtQ99541 [Medical]
TSGene123
GENETestsPLIN2
Huge Navigator PLIN2 [HugePedia]
snp3D : Map Gene to Disease123
BioCentury BCIQPLIN2
ClinGenPLIN2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD123
Chemical/Pharm GKB GenePA24569
Clinical trialPLIN2
Miscellaneous
canSAR (ICR)PLIN2 (select the gene name)
Probes
Litterature
PubMed73 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLIN2
EVEXPLIN2
GoPubMedPLIN2
iHOPPLIN2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:31:39 CEST 2017

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