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PLIN4 (perilipin 4)

Identity

Alias_namesKIAA1881
KIAA1881
Alias_symbol (synonym)S3-12
Other alias
HGNC (Hugo) PLIN4
LocusID (NCBI) 729359
Atlas_Id 71997
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 4502192 and ends at 4517716 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PLIN4   29393
Cards
Entrez_Gene (NCBI)PLIN4  729359  perilipin 4
AliasesKIAA1881; S3-12
GeneCards (Weizmann)PLIN4
Ensembl hg19 (Hinxton)ENSG00000167676 [Gene_View]  chr19:4502192-4517716 [Contig_View]  PLIN4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167676 [Gene_View]  chr19:4502192-4517716 [Contig_View]  PLIN4 [Vega]
ICGC DataPortalENSG00000167676
TCGA cBioPortalPLIN4
AceView (NCBI)PLIN4
Genatlas (Paris)PLIN4
WikiGenes729359
SOURCE (Princeton)PLIN4
Genetics Home Reference (NIH)PLIN4
Genomic and cartography
GoldenPath hg19 (UCSC)PLIN4  -     chr19:4502192-4517716 -  19p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PLIN4  -     19p13.3   [Description]    (hg38-Dec_2013)
EnsemblPLIN4 - 19p13.3 [CytoView hg19]  PLIN4 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBIPLIN4 [Mapview hg19]  PLIN4 [Mapview hg38]
OMIM613247   
Gene and transcription
Genbank (Entrez)AB067468 AK295236 BC153818
RefSeq transcript (Entrez)NM_001080400
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929412
Consensus coding sequences : CCDS (NCBI)PLIN4
Cluster EST : UnigeneHs.591387 [ NCBI ]
CGAP (NCI)Hs.591387
Alternative Splicing GalleryENSG00000167676
Gene ExpressionPLIN4 [ NCBI-GEO ]   PLIN4 [ EBI - ARRAY_EXPRESS ]   PLIN4 [ SEEK ]   PLIN4 [ MEM ]
Gene Expression Viewer (FireBrowse)PLIN4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729359
GTEX Portal (Tissue expression)PLIN4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96Q06   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96Q06  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96Q06
Splice isoforms : SwissVarQ96Q06
PhosPhoSitePlusQ96Q06
Domains : Interpro (EBI)Perilipin   
Domain families : Pfam (Sanger)Perilipin (PF03036)   
Domain families : Pfam (NCBI)pfam03036   
Conserved Domain (NCBI)PLIN4
DMDM Disease mutations729359
Blocks (Seattle)PLIN4
SuperfamilyQ96Q06
Human Protein AtlasENSG00000167676
Peptide AtlasQ96Q06
IPIIPI00044608   IPI00855902   
Protein Interaction databases
DIP (DOE-UCLA)Q96Q06
IntAct (EBI)Q96Q06
FunCoupENSG00000167676
BioGRIDPLIN4
STRING (EMBL)PLIN4
ZODIACPLIN4
Ontologies - Pathways
QuickGOQ96Q06
Ontology : AmiGOcytoplasm  lipid particle  plasma membrane  
Ontology : EGO-EBIcytoplasm  lipid particle  plasma membrane  
NDEx NetworkPLIN4
Atlas of Cancer Signalling NetworkPLIN4
Wikipedia pathwaysPLIN4
Orthology - Evolution
OrthoDB729359
GeneTree (enSembl)ENSG00000167676
Phylogenetic Trees/Animal Genes : TreeFamPLIN4
HOVERGENQ96Q06
HOGENOMQ96Q06
Homologs : HomoloGenePLIN4
Homology/Alignments : Family Browser (UCSC)PLIN4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPLIN4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PLIN4
dbVarPLIN4
ClinVarPLIN4
1000_GenomesPLIN4 
Exome Variant ServerPLIN4
ExAC (Exome Aggregation Consortium)PLIN4 (select the gene name)
Genetic variants : HAPMAP729359
Genomic Variants (DGV)PLIN4 [DGVbeta]
DECIPHER (Syndromes)19:4502192-4517716  ENSG00000167676
CONAN: Copy Number AnalysisPLIN4 
Mutations
ICGC Data PortalPLIN4 
TCGA Data PortalPLIN4 
Broad Tumor PortalPLIN4
OASIS PortalPLIN4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPLIN4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPLIN4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PLIN4
DgiDB (Drug Gene Interaction Database)PLIN4
DoCM (Curated mutations)PLIN4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PLIN4 (select a term)
intoGenPLIN4
Cancer3DPLIN4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613247   
Orphanet
MedgenPLIN4
Genetic Testing Registry PLIN4
NextProtQ96Q06 [Medical]
TSGene729359
GENETestsPLIN4
Huge Navigator PLIN4 [HugePedia]
snp3D : Map Gene to Disease729359
BioCentury BCIQPLIN4
ClinGenPLIN4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729359
Chemical/Pharm GKB GenePA165394042
Clinical trialPLIN4
Miscellaneous
canSAR (ICR)PLIN4 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLIN4
EVEXPLIN4
GoPubMedPLIN4
iHOPPLIN4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:38:56 CET 2017

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