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PLLP (plasmolipin)

Identity

Alias_namesTM4SF11
transmembrane 4 superfamily member 11 (plasmolipin)
plasma membrane proteolipid (plasmolipin)
Alias_symbol (synonym)PMLP
Other alias
HGNC (Hugo) PLLP
LocusID (NCBI) 51090
Atlas_Id 71999
Location 16q13  [Link to chromosome band 16q13]
Location_base_pair Starts at 57256097 and ends at 57284672 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PLLP   18553
Cards
Entrez_Gene (NCBI)PLLP  51090  plasmolipin
AliasesPMLP; TM4SF11
GeneCards (Weizmann)PLLP
Ensembl hg19 (Hinxton)ENSG00000102934 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102934 [Gene_View]  chr16:57256097-57284672 [Contig_View]  PLLP [Vega]
ICGC DataPortalENSG00000102934
TCGA cBioPortalPLLP
AceView (NCBI)PLLP
Genatlas (Paris)PLLP
WikiGenes51090
SOURCE (Princeton)PLLP
Genetics Home Reference (NIH)PLLP
Genomic and cartography
GoldenPath hg38 (UCSC)PLLP  -     chr16:57256097-57284672 -  16q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLLP  -     16q13   [Description]    (hg19-Feb_2009)
EnsemblPLLP - 16q13 [CytoView hg19]  PLLP - 16q13 [CytoView hg38]
Mapping of homologs : NCBIPLLP [Mapview hg19]  PLLP [Mapview hg38]
OMIM600340   
Gene and transcription
Genbank (Entrez)AF137386 AK130584 AK289599 AK313910 BC002760
RefSeq transcript (Entrez)NM_015993
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PLLP
Cluster EST : UnigeneHs.632215 [ NCBI ]
CGAP (NCI)Hs.632215
Alternative Splicing GalleryENSG00000102934
Gene ExpressionPLLP [ NCBI-GEO ]   PLLP [ EBI - ARRAY_EXPRESS ]   PLLP [ SEEK ]   PLLP [ MEM ]
Gene Expression Viewer (FireBrowse)PLLP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51090
GTEX Portal (Tissue expression)PLLP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y342   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y342  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y342
Splice isoforms : SwissVarQ9Y342
PhosPhoSitePlusQ9Y342
Domaine pattern : Prosite (Expaxy)MARVEL (PS51225)   
Domains : Interpro (EBI)MAL    Marvel   
Domain families : Pfam (Sanger)MARVEL (PF01284)   
Domain families : Pfam (NCBI)pfam01284   
Conserved Domain (NCBI)PLLP
DMDM Disease mutations51090
Blocks (Seattle)PLLP
SuperfamilyQ9Y342
Human Protein AtlasENSG00000102934
Peptide AtlasQ9Y342
HPRD11854
IPIIPI00032485   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y342
IntAct (EBI)Q9Y342
FunCoupENSG00000102934
BioGRIDPLLP
STRING (EMBL)PLLP
ZODIACPLLP
Ontologies - Pathways
QuickGOQ9Y342
Ontology : AmiGOmembrane raft polarization  protein binding  ion transport  protein localization  response to wounding  integral component of membrane  structural constituent of myelin sheath  myelination  compact myelin  membrane raft  extracellular exosome  
Ontology : EGO-EBImembrane raft polarization  protein binding  ion transport  protein localization  response to wounding  integral component of membrane  structural constituent of myelin sheath  myelination  compact myelin  membrane raft  extracellular exosome  
NDEx NetworkPLLP
Atlas of Cancer Signalling NetworkPLLP
Wikipedia pathwaysPLLP
Orthology - Evolution
OrthoDB51090
GeneTree (enSembl)ENSG00000102934
Phylogenetic Trees/Animal Genes : TreeFamPLLP
HOVERGENQ9Y342
HOGENOMQ9Y342
Homologs : HomoloGenePLLP
Homology/Alignments : Family Browser (UCSC)PLLP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPLLP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PLLP
dbVarPLLP
ClinVarPLLP
1000_GenomesPLLP 
Exome Variant ServerPLLP
ExAC (Exome Aggregation Consortium)PLLP (select the gene name)
Genetic variants : HAPMAP51090
Genomic Variants (DGV)PLLP [DGVbeta]
DECIPHERPLLP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPLLP 
Mutations
ICGC Data PortalPLLP 
TCGA Data PortalPLLP 
Broad Tumor PortalPLLP
OASIS PortalPLLP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPLLP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPLLP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PLLP
DgiDB (Drug Gene Interaction Database)PLLP
DoCM (Curated mutations)PLLP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PLLP (select a term)
intoGenPLLP
Cancer3DPLLP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600340   
Orphanet
MedgenPLLP
Genetic Testing Registry PLLP
NextProtQ9Y342 [Medical]
TSGene51090
GENETestsPLLP
Target ValidationPLLP
Huge Navigator PLLP [HugePedia]
snp3D : Map Gene to Disease51090
BioCentury BCIQPLLP
ClinGenPLLP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51090
Chemical/Pharm GKB GenePA38572
Clinical trialPLLP
Miscellaneous
canSAR (ICR)PLLP (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLLP
EVEXPLLP
GoPubMedPLLP
iHOPPLLP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed May 31 15:36:39 CEST 2017

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