Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PLPP4 (phospholipid phosphatase 4)

Identity

Alias_namesPPAPDC1
PPAPDC1A
phosphatidic acid phosphatase type 2 domain containing 1
phosphatidic acid phosphatase type 2 domain containing 1A
Alias_symbol (synonym)DPPL2
Other alias
HGNC (Hugo) PLPP4
LocusID (NCBI) 196051
Atlas_Id 77949
Location 10q26.12  [Link to chromosome band 10q26]
Location_base_pair Starts at 122216466 and ends at 122349367 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
C10orf88 (10q26.13) / PLPP4 (10q26.12)DOCK1 (10q26.2) / PLPP4 (10q26.12)MOB1B (4q13.3) / PLPP4 (10q26.12)
PLPP4 (10q26.12) / C10orf82 (10q25.3)PLPP4 (10q26.12) / CXCR1 (2q35)PVT1 (8q24.21) / PLPP4 (10q26.12)
RAPGEF5 (7p15.3) / PLPP4 (10q26.12)SREBF2 (22q13.2) / PLPP4 (10q26.12)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PLPP4   23531
Cards
Entrez_Gene (NCBI)PLPP4  196051  phospholipid phosphatase 4
AliasesDPPL2; PPAPDC1; PPAPDC1A
GeneCards (Weizmann)PLPP4
Ensembl hg19 (Hinxton)ENSG00000203805 [Gene_View]  chr10:122216466-122349367 [Contig_View]  PLPP4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000203805 [Gene_View]  chr10:122216466-122349367 [Contig_View]  PLPP4 [Vega]
ICGC DataPortalENSG00000203805
TCGA cBioPortalPLPP4
AceView (NCBI)PLPP4
Genatlas (Paris)PLPP4
WikiGenes196051
SOURCE (Princeton)PLPP4
Genetics Home Reference (NIH)PLPP4
Genomic and cartography
GoldenPath hg19 (UCSC)PLPP4  -     chr10:122216466-122349367 +  10q26.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PLPP4  -     10q26.12   [Description]    (hg38-Dec_2013)
EnsemblPLPP4 - 10q26.12 [CytoView hg19]  PLPP4 - 10q26.12 [CytoView hg38]
Mapping of homologs : NCBIPLPP4 [Mapview hg19]  PLPP4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001030059 NM_001318166 NM_001318167 NM_001318168 NM_001318169
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)PLPP4
Cluster EST : UnigeneHs.40479 [ NCBI ]
CGAP (NCI)Hs.40479
Alternative Splicing GalleryENSG00000203805
Gene ExpressionPLPP4 [ NCBI-GEO ]   PLPP4 [ EBI - ARRAY_EXPRESS ]   PLPP4 [ SEEK ]   PLPP4 [ MEM ]
Gene Expression Viewer (FireBrowse)PLPP4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)196051
GTEX Portal (Tissue expression)PLPP4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLPP4
DMDM Disease mutations196051
Blocks (Seattle)PLPP4
Human Protein AtlasENSG00000203805
HPRD18745
IPIIPI00151444   IPI00845503   IPI00845417   IPI00922450   IPI00646785   
Protein Interaction databases
FunCoupENSG00000203805
BioGRIDPLPP4
STRING (EMBL)PLPP4
ZODIACPLPP4
Ontologies - Pathways
Huge Navigator PLPP4 [HugePedia]
snp3D : Map Gene to Disease196051
BioCentury BCIQPLPP4
ClinGenPLPP4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196051
Chemical/Pharm GKB GenePA134907381
Clinical trialPLPP4
Miscellaneous
canSAR (ICR)PLPP4 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLPP4
EVEXPLPP4
GoPubMedPLPP4
iHOPPLPP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:38:57 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.