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PLPP7 (phospholipid phosphatase 7 (inactive))

Identity

Alias_namesC9orf67
PPAPDC3
chromosome 9 open reading frame 67
phosphatidic acid phosphatase type 2 domain containing 3
Alias_symbol (synonym)MGC12921
FLJ14662
NET39
Other alias
HGNC (Hugo) PLPP7
LocusID (NCBI) 84814
Atlas_Id 77951
Location 9q34.13  [Link to chromosome band 9q34]
Location_base_pair Starts at 131289694 and ends at 131309262 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EML4 (2p21) / PLPP7 (9q34.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PLPP7   28174
Cards
Entrez_Gene (NCBI)PLPP7  84814  phospholipid phosphatase 7 (inactive)
AliasesC9orf67; NET39; PPAPDC3
GeneCards (Weizmann)PLPP7
Ensembl hg19 (Hinxton)ENSG00000160539 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160539 [Gene_View]  chr9:131289694-131309262 [Contig_View]  PLPP7 [Vega]
ICGC DataPortalENSG00000160539
TCGA cBioPortalPLPP7
AceView (NCBI)PLPP7
Genatlas (Paris)PLPP7
WikiGenes84814
SOURCE (Princeton)PLPP7
Genetics Home Reference (NIH)PLPP7
Genomic and cartography
GoldenPath hg38 (UCSC)PLPP7  -     chr9:131289694-131309262 +  9q34.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PLPP7  -     9q34.13   [Description]    (hg19-Feb_2009)
EnsemblPLPP7 - 9q34.13 [CytoView hg19]  PLPP7 - 9q34.13 [CytoView hg38]
Mapping of homologs : NCBIPLPP7 [Mapview hg19]  PLPP7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK027568 AK075207 AK315502 BC006362
RefSeq transcript (Entrez)NM_032728
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PLPP7
Cluster EST : UnigeneHs.134292 [ NCBI ]
CGAP (NCI)Hs.134292
Alternative Splicing GalleryENSG00000160539
Gene ExpressionPLPP7 [ NCBI-GEO ]   PLPP7 [ EBI - ARRAY_EXPRESS ]   PLPP7 [ SEEK ]   PLPP7 [ MEM ]
Gene Expression Viewer (FireBrowse)PLPP7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84814
GTEX Portal (Tissue expression)PLPP7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBV4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBV4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBV4
Splice isoforms : SwissVarQ8NBV4
PhosPhoSitePlusQ8NBV4
Domains : Interpro (EBI)P_Acid_Pase_2/haloperoxidase   
Domain families : Pfam (Sanger)PAP2 (PF01569)   
Domain families : Pfam (NCBI)pfam01569   
Domain families : Smart (EMBL)acidPPc (SM00014)  
Conserved Domain (NCBI)PLPP7
DMDM Disease mutations84814
Blocks (Seattle)PLPP7
SuperfamilyQ8NBV4
Human Protein AtlasENSG00000160539
Peptide AtlasQ8NBV4
HPRD12972
IPIIPI00168333   IPI00640438   
Protein Interaction databases
DIP (DOE-UCLA)Q8NBV4
IntAct (EBI)Q8NBV4
FunCoupENSG00000160539
BioGRIDPLPP7
STRING (EMBL)PLPP7
ZODIACPLPP7
Ontologies - Pathways
QuickGOQ8NBV4
Ontology : AmiGOnuclear envelope  endoplasmic reticulum membrane  negative regulation of myotube differentiation  integral component of membrane  
Ontology : EGO-EBInuclear envelope  endoplasmic reticulum membrane  negative regulation of myotube differentiation  integral component of membrane  
NDEx NetworkPLPP7
Atlas of Cancer Signalling NetworkPLPP7
Wikipedia pathwaysPLPP7
Orthology - Evolution
OrthoDB84814
GeneTree (enSembl)ENSG00000160539
Phylogenetic Trees/Animal Genes : TreeFamPLPP7
HOVERGENQ8NBV4
HOGENOMQ8NBV4
Homologs : HomoloGenePLPP7
Homology/Alignments : Family Browser (UCSC)PLPP7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPLPP7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PLPP7
dbVarPLPP7
ClinVarPLPP7
1000_GenomesPLPP7 
Exome Variant ServerPLPP7
ExAC (Exome Aggregation Consortium)PLPP7 (select the gene name)
Genetic variants : HAPMAP84814
Genomic Variants (DGV)PLPP7 [DGVbeta]
DECIPHERPLPP7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPLPP7 
Mutations
ICGC Data PortalPLPP7 
TCGA Data PortalPLPP7 
Broad Tumor PortalPLPP7
OASIS PortalPLPP7 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPLPP7
BioMutasearch PLPP7
DgiDB (Drug Gene Interaction Database)PLPP7
DoCM (Curated mutations)PLPP7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PLPP7 (select a term)
intoGenPLPP7
Cancer3DPLPP7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPLPP7
Genetic Testing Registry PLPP7
NextProtQ8NBV4 [Medical]
TSGene84814
GENETestsPLPP7
Target ValidationPLPP7
Huge Navigator PLPP7 [HugePedia]
snp3D : Map Gene to Disease84814
BioCentury BCIQPLPP7
ClinGenPLPP7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84814
Chemical/Pharm GKB GenePA134931886
Clinical trialPLPP7
Miscellaneous
canSAR (ICR)PLPP7 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLPP7
EVEXPLPP7
GoPubMedPLPP7
iHOPPLPP7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed May 31 15:36:40 CEST 2017

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