Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PLPPR2 (phospholipid phosphatase related 2)

Identity

Alias_symbol (synonym)LPPR2
PRG-4
Other aliasPRG4
HGNC (Hugo) PLPPR2
LocusID (NCBI) 64748
Atlas_Id 77953
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 11466062 and ends at 11476374 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PLPPR2 (19p13.2) / COPS6 (7q22.1)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PLPPR2   29566
Cards
Entrez_Gene (NCBI)PLPPR2  64748  phospholipid phosphatase related 2
AliasesLPPR2; PRG4
GeneCards (Weizmann)PLPPR2
Ensembl hg19 (Hinxton)ENSG00000105520 [Gene_View]  chr19:11466062-11476374 [Contig_View]  PLPPR2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000105520 [Gene_View]  chr19:11466062-11476374 [Contig_View]  PLPPR2 [Vega]
ICGC DataPortalENSG00000105520
TCGA cBioPortalPLPPR2
AceView (NCBI)PLPPR2
Genatlas (Paris)PLPPR2
WikiGenes64748
SOURCE (Princeton)PLPPR2
Genetics Home Reference (NIH)PLPPR2
Genomic and cartography
GoldenPath hg19 (UCSC)PLPPR2  -     chr19:11466062-11476374 +  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PLPPR2  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblPLPPR2 - 19p13.2 [CytoView hg19]  PLPPR2 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIPLPPR2 [Mapview hg19]  PLPPR2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001170635 NM_022737
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)PLPPR2
Cluster EST : UnigeneHs.6846 [ NCBI ]
CGAP (NCI)Hs.6846
Alternative Splicing GalleryENSG00000105520
Gene ExpressionPLPPR2 [ NCBI-GEO ]   PLPPR2 [ EBI - ARRAY_EXPRESS ]   PLPPR2 [ SEEK ]   PLPPR2 [ MEM ]
Gene Expression Viewer (FireBrowse)PLPPR2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)64748
GTEX Portal (Tissue expression)PLPPR2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLPPR2
DMDM Disease mutations64748
Blocks (Seattle)PLPPR2
Human Protein AtlasENSG00000105520
HPRD17442
IPIIPI00396363   IPI00166272   
Protein Interaction databases
FunCoupENSG00000105520
BioGRIDPLPPR2
STRING (EMBL)PLPPR2
ZODIACPLPPR2
Ontologies - Pathways
Huge Navigator PLPPR2 [HugePedia]
snp3D : Map Gene to Disease64748
BioCentury BCIQPLPPR2
ClinGenPLPPR2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64748
Clinical trialPLPPR2
Miscellaneous
canSAR (ICR)PLPPR2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLPPR2
EVEXPLPPR2
GoPubMedPLPPR2
iHOPPLPPR2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:38:58 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.