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PLPPR4 (phospholipid phosphatase related 4)

Identity

Alias_symbol (synonym)PRG-1
LPPR4
KIAA0455
PHP1
Other aliasLPR4
PRG1
HGNC (Hugo) PLPPR4
LocusID (NCBI) 9890
Atlas_Id 77955
Location 1p21.2  [Link to chromosome band 1p21]
Location_base_pair Starts at 99729848 and ends at 99775138 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PLPPR4 (1p21.2) / REPIN1 (7q36.1)PLPPR4 (1p21.2) / SENP2 (3q27.2)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PLPPR4   23496
Cards
Entrez_Gene (NCBI)PLPPR4  9890  phospholipid phosphatase related 4
AliasesLPPR4; LPR4; PHP1; PRG-1; 
PRG1
GeneCards (Weizmann)PLPPR4
Ensembl hg19 (Hinxton)ENSG00000117600 [Gene_View]  chr1:99729848-99775138 [Contig_View]  PLPPR4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000117600 [Gene_View]  chr1:99729848-99775138 [Contig_View]  PLPPR4 [Vega]
ICGC DataPortalENSG00000117600
TCGA cBioPortalPLPPR4
AceView (NCBI)PLPPR4
Genatlas (Paris)PLPPR4
WikiGenes9890
SOURCE (Princeton)PLPPR4
Genetics Home Reference (NIH)PLPPR4
Genomic and cartography
GoldenPath hg19 (UCSC)PLPPR4  -     chr1:99729848-99775138 +  1p21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PLPPR4  -     1p21.2   [Description]    (hg38-Dec_2013)
EnsemblPLPPR4 - 1p21.2 [CytoView hg19]  PLPPR4 - 1p21.2 [CytoView hg38]
Mapping of homologs : NCBIPLPPR4 [Mapview hg19]  PLPPR4 [Mapview hg38]
OMIM607813   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001166252 NM_014839
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)PLPPR4
Cluster EST : UnigeneHs.13245 [ NCBI ]
CGAP (NCI)Hs.13245
Alternative Splicing GalleryENSG00000117600
Gene ExpressionPLPPR4 [ NCBI-GEO ]   PLPPR4 [ EBI - ARRAY_EXPRESS ]   PLPPR4 [ SEEK ]   PLPPR4 [ MEM ]
Gene Expression Viewer (FireBrowse)PLPPR4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)9890
GTEX Portal (Tissue expression)PLPPR4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLPPR4
DMDM Disease mutations9890
Blocks (Seattle)PLPPR4
Human Protein AtlasENSG00000117600
HPRD07425
IPIIPI00337643   IPI00844586   IPI00640138   
Protein Interaction databases
FunCoupENSG00000117600
BioGRIDPLPPR4
STRING (EMBL)PLPPR4
ZODIACPLPPR4
Ontologies - Pathways
Huge Navigator PLPPR4 [HugePedia]
snp3D : Map Gene to Disease9890
BioCentury BCIQPLPPR4
ClinGenPLPPR4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9890
Clinical trialPLPPR4
Miscellaneous
canSAR (ICR)PLPPR4 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLPPR4
EVEXPLPPR4
GoPubMedPLPPR4
iHOPPLPPR4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:38:59 CET 2017

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