Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PLPPR5 (phospholipid phosphatase related 5)

Identity

Alias_symbol (synonym)PAP2D
PAP2
LPPR5
PRG5
Other alias
HGNC (Hugo) PLPPR5
LocusID (NCBI) 163404
Atlas_Id 77956
Location 1p21.3  [Link to chromosome band 1p21]
Location_base_pair Starts at 99355801 and ends at 99470449 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PLPPR5 (1p21.3) / FGF13 (Xq26.3)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PLPPR5   31703
Cards
Entrez_Gene (NCBI)PLPPR5  163404  phospholipid phosphatase related 5
AliasesLPPR5; PAP2; PAP2D; PRG5
GeneCards (Weizmann)PLPPR5
Ensembl hg19 (Hinxton)ENSG00000117598 [Gene_View]  chr1:99355801-99470449 [Contig_View]  PLPPR5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000117598 [Gene_View]  chr1:99355801-99470449 [Contig_View]  PLPPR5 [Vega]
ICGC DataPortalENSG00000117598
TCGA cBioPortalPLPPR5
AceView (NCBI)PLPPR5
Genatlas (Paris)PLPPR5
WikiGenes163404
SOURCE (Princeton)PLPPR5
Genetics Home Reference (NIH)PLPPR5
Genomic and cartography
GoldenPath hg19 (UCSC)PLPPR5  -     chr1:99355801-99470449 -  1p21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PLPPR5  -     1p21.3   [Description]    (hg38-Dec_2013)
EnsemblPLPPR5 - 1p21.3 [CytoView hg19]  PLPPR5 - 1p21.3 [CytoView hg38]
Mapping of homologs : NCBIPLPPR5 [Mapview hg19]  PLPPR5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001010861 NM_001037317
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)PLPPR5
Cluster EST : UnigeneHs.483948 [ NCBI ]
CGAP (NCI)Hs.483948
Alternative Splicing GalleryENSG00000117598
Gene ExpressionPLPPR5 [ NCBI-GEO ]   PLPPR5 [ EBI - ARRAY_EXPRESS ]   PLPPR5 [ SEEK ]   PLPPR5 [ MEM ]
Gene Expression Viewer (FireBrowse)PLPPR5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)163404
GTEX Portal (Tissue expression)PLPPR5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PLPPR5
DMDM Disease mutations163404
Blocks (Seattle)PLPPR5
Human Protein AtlasENSG00000117598
HPRD12966
IPIIPI00656084   IPI00402043   
Protein Interaction databases
FunCoupENSG00000117598
BioGRIDPLPPR5
STRING (EMBL)PLPPR5
ZODIACPLPPR5
Ontologies - Pathways
Huge Navigator PLPPR5 [HugePedia]
snp3D : Map Gene to Disease163404
BioCentury BCIQPLPPR5
ClinGenPLPPR5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD163404
Clinical trialPLPPR5
Miscellaneous
canSAR (ICR)PLPPR5 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePLPPR5
EVEXPLPPR5
GoPubMedPLPPR5
iHOPPLPPR5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:38:59 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.