Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PMS2P7 (PMS1 homolog 2, mismatch repair system component pseudogene 7)

Identity

Alias_namesPMS2LP2
PMS2L15
postmeiotic segregation increased 2-like pseudogene 2
postmeiotic segregation increased 2-like 15
postmeiotic segregation increased 2 pseudogene 7
Alias_symbol (synonym)PMSR7
Other alias
HGNC (Hugo) PMS2P7
LocusID (NCBI) 100101440
Atlas_Id 55363
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 73006080 and ends at 73016375 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PMS2P7   33515
Cards
Entrez_Gene (NCBI)PMS2P7  100101440  PMS1 homolog 2, mismatch repair system component pseudogene 7
AliasesPMS2L15; PMS2LP2; PMSR7
GeneCards (Weizmann)PMS2P7
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:73006080-73016375 [Contig_View]  PMS2P7 [Vega]
TCGA cBioPortalPMS2P7
AceView (NCBI)PMS2P7
Genatlas (Paris)PMS2P7
WikiGenes100101440
SOURCE (Princeton)PMS2P7
Genetics Home Reference (NIH)PMS2P7
Genomic and cartography
GoldenPath hg38 (UCSC)PMS2P7  -     chr7:73006080-73016375 +  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PMS2P7  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblPMS2P7 - 7q11.23 [CytoView hg19]  PMS2P7 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBIPMS2P7 [Mapview hg19]  PMS2P7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB017006 DB472687
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PMS2P7
Cluster EST : UnigeneHs.292996 [ NCBI ]
CGAP (NCI)Hs.292996
Gene ExpressionPMS2P7 [ NCBI-GEO ]   PMS2P7 [ EBI - ARRAY_EXPRESS ]   PMS2P7 [ SEEK ]   PMS2P7 [ MEM ]
Gene Expression Viewer (FireBrowse)PMS2P7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100101440
GTEX Portal (Tissue expression)PMS2P7
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PMS2P7
DMDM Disease mutations100101440
Blocks (Seattle)PMS2P7
Protein Interaction databases
BioGRIDPMS2P7
STRING (EMBL)PMS2P7
ZODIACPMS2P7
Ontologies - Pathways
Huge Navigator PMS2P7 [HugePedia]
snp3D : Map Gene to Disease100101440
BioCentury BCIQPMS2P7
ClinGenPMS2P7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100101440
Chemical/Pharm GKB GenePA33462
Clinical trialPMS2P7
Miscellaneous
canSAR (ICR)PMS2P7 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePMS2P7
EVEXPMS2P7
GoPubMedPMS2P7
iHOPPMS2P7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:29:21 CET 2017

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