Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PNKY (long intergenic non-protein coding RNA PNKY)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 105447646
Atlas_Id 79670
Location 6q16.1  [Link to chromosome band 6q16]
Location_base_pair Starts at 98830141 and ends at 98831700 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)PNKY  105447646  long intergenic non-protein coding RNA PNKY
Aliases
GeneCards (Weizmann)PNKY
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:98830141-98831700 [Contig_View]  PNKY [Vega]
TCGA cBioPortalPNKY
AceView (NCBI)PNKY
Genatlas (Paris)PNKY
WikiGenes105447646
SOURCE (Princeton)PNKY
Genetics Home Reference (NIH)PNKY
Genomic and cartography
GoldenPath hg38 (UCSC)PNKY  -     chr6:98830141-98831700 -  6q16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PNKY  -     6q16.1   [Description]    (hg19-Feb_2009)
GoldenPathPNKY - 6q16.1 [CytoView hg19]  PNKY - 6q16.1 [CytoView hg38]
genome Data Viewer NCBIPNKY [Mapview hg19]  
OMIM616328   
Gene and transcription
Genbank (Entrez)AI826101 CD514235 KP881341
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PNKY
Gene ExpressionPNKY [ NCBI-GEO ]   PNKY [ EBI - ARRAY_EXPRESS ]   PNKY [ SEEK ]   PNKY [ MEM ]
Gene Expression Viewer (FireBrowse)PNKY [ Firebrowse - Broad ]
GenevisibleExpression of PNKY in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105447646
GTEX Portal (Tissue expression)PNKY
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PNKY
DMDM Disease mutations105447646
Blocks (Seattle)PNKY
Protein Interaction databases
BioGRIDPNKY
STRING (EMBL)PNKY
ZODIACPNKY
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105447646
BioCentury BCIQPNKY
ClinGenPNKY
Clinical trials, drugs, therapy
Protein Interactions : CTD105447646
Clinical trialPNKY
Miscellaneous
canSAR (ICR)PNKY (select the gene name)
HarmonizomePNKY
DataMed IndexPNKY
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePNKY
EVEXPNKY
GoPubMedPNKY
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Aug 22 19:31:35 CEST 2020

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