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PNLIPRP3 (pancreatic lipase related protein 3)

Identity

Alias (NCBI)-
HGNC (Hugo) PNLIPRP3
LocusID (NCBI) 119548
Atlas_Id 51298
Location 10q25.3  [Link to chromosome band 10q25]
Location_base_pair Starts at 116427847 and ends at 116477956 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AUTS2 (7q11.22) / PNLIPRP3 (10q25.3)LCOR (10q24.1) / PNLIPRP3 (10q25.3)PNLIPRP3 (10q25.3) / CIRBP (19p13.3)
AUTS2 7q11.22 / PNLIPRP3 10q25.3LCOR 10q24.1 / PNLIPRP3 10q25.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PNLIPRP3   23492
Cards
Entrez_Gene (NCBI)PNLIPRP3    pancreatic lipase related protein 3
Aliases
GeneCards (Weizmann)PNLIPRP3
Ensembl hg19 (Hinxton)ENSG00000203837 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203837 [Gene_View]  ENSG00000203837 [Sequence]  chr10:116427847-116477956 [Contig_View]  PNLIPRP3 [Vega]
ICGC DataPortalENSG00000203837
TCGA cBioPortalPNLIPRP3
AceView (NCBI)PNLIPRP3
Genatlas (Paris)PNLIPRP3
SOURCE (Princeton)PNLIPRP3
Genetics Home Reference (NIH)PNLIPRP3
Genomic and cartography
GoldenPath hg38 (UCSC)PNLIPRP3  -     chr10:116427847-116477956 +  10q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PNLIPRP3  -     10q25.3   [Description]    (hg19-Feb_2009)
GoldenPathPNLIPRP3 - 10q25.3 [CytoView hg19]  PNLIPRP3 - 10q25.3 [CytoView hg38]
ImmunoBaseENSG00000203837
Genome Data Viewer NCBIPNLIPRP3 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL833418 BC015840 BC065752 BC117224
RefSeq transcript (Entrez)NM_001011709
Consensus coding sequences : CCDS (NCBI)PNLIPRP3
Gene ExpressionPNLIPRP3 [ NCBI-GEO ]   PNLIPRP3 [ EBI - ARRAY_EXPRESS ]   PNLIPRP3 [ SEEK ]   PNLIPRP3 [ MEM ]
Gene Expression Viewer (FireBrowse)PNLIPRP3 [ Firebrowse - Broad ]
GenevisibleExpression of PNLIPRP3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)119548
GTEX Portal (Tissue expression)PNLIPRP3
Human Protein AtlasENSG00000203837-PNLIPRP3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ17RR3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ17RR3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ17RR3
Catalytic activity : Enzyme3.1.1.3 [ Enzyme-Expasy ]   3.1.1.33.1.1.3 [ IntEnz-EBI ]   3.1.1.3 [ BRENDA ]   3.1.1.3 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ17RR3
Domaine pattern : Prosite (Expaxy)LIPASE_SER (PS00120)   
Domains : Interpro (EBI)AB_hydrolase    Lipase/vitellogenin    Lipase_LIPH    Lipase_N    Lipase_panc    PLAT/LH2_dom    PLAT/LH2_dom_sf    TAG_lipase   
Domain families : Pfam (Sanger)Lipase (PF00151)    PLAT (PF01477)   
Domain families : Pfam (NCBI)pfam00151    pfam01477   
Conserved Domain (NCBI)PNLIPRP3
SuperfamilyQ17RR3
AlphaFold pdb e-kbQ17RR3   
Human Protein Atlas [tissue]ENSG00000203837-PNLIPRP3 [tissue]
HPRD18542
Protein Interaction databases
DIP (DOE-UCLA)Q17RR3
IntAct (EBI)Q17RR3
BioGRIDPNLIPRP3
STRING (EMBL)PNLIPRP3
ZODIACPNLIPRP3
Ontologies - Pathways
QuickGOQ17RR3
Ontology : AmiGOtriglyceride lipase activity  extracellular space  lipid catabolic process  lipase activity  
Ontology : EGO-EBItriglyceride lipase activity  extracellular space  lipid catabolic process  lipase activity  
Pathways : KEGGGlycerolipid metabolism   
NDEx NetworkPNLIPRP3
Atlas of Cancer Signalling NetworkPNLIPRP3
Wikipedia pathwaysPNLIPRP3
Orthology - Evolution
OrthoDB119548
GeneTree (enSembl)ENSG00000203837
Phylogenetic Trees/Animal Genes : TreeFamPNLIPRP3
Homologs : HomoloGenePNLIPRP3
Homology/Alignments : Family Browser (UCSC)PNLIPRP3
Gene fusions - Rearrangements
Fusion : MitelmanAUTS2/PNLIPRP3 [7q11.22/10q25.3]  
Fusion : MitelmanLCOR/PNLIPRP3 [10q24.1/10q25.3]  
Fusion : QuiverPNLIPRP3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPNLIPRP3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PNLIPRP3
dbVarPNLIPRP3
ClinVarPNLIPRP3
MonarchPNLIPRP3
1000_GenomesPNLIPRP3 
Exome Variant ServerPNLIPRP3
GNOMAD BrowserENSG00000203837
Varsome BrowserPNLIPRP3
ACMGPNLIPRP3 variants
VarityQ17RR3
Genomic Variants (DGV)PNLIPRP3 [DGVbeta]
DECIPHERPNLIPRP3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPNLIPRP3 
Mutations
ICGC Data PortalPNLIPRP3 
TCGA Data PortalPNLIPRP3 
Broad Tumor PortalPNLIPRP3
OASIS PortalPNLIPRP3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPNLIPRP3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPNLIPRP3
Mutations and Diseases : HGMDPNLIPRP3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPNLIPRP3
DgiDB (Drug Gene Interaction Database)PNLIPRP3
DoCM (Curated mutations)PNLIPRP3
CIViC (Clinical Interpretations of Variants in Cancer)PNLIPRP3
Cancer3DPNLIPRP3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPNLIPRP3
MedgenPNLIPRP3
Genetic Testing Registry PNLIPRP3
NextProtQ17RR3 [Medical]
GENETestsPNLIPRP3
Target ValidationPNLIPRP3
Huge Navigator PNLIPRP3 [HugePedia]
ClinGenPNLIPRP3
Clinical trials, drugs, therapy
MyCancerGenomePNLIPRP3
Protein Interactions : CTDPNLIPRP3
Pharm GKB GenePA134954941
PharosQ17RR3
Clinical trialPNLIPRP3
Miscellaneous
canSAR (ICR)PNLIPRP3
HarmonizomePNLIPRP3
DataMed IndexPNLIPRP3
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPNLIPRP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:25:56 CEST 2021

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