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PNMA6E (paraneoplastic Ma antigen family member 6E)

Identity

Other alias-
HGNC (Hugo) PNMA6E
LocusID (NCBI) 649238
Atlas_Id 79465
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 153395639 and ends at 153401420 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PNMA6E   50767
Cards
Entrez_Gene (NCBI)PNMA6E  649238  paraneoplastic Ma antigen family member 6E
Aliases
GeneCards (Weizmann)PNMA6E
Ensembl hg19 (Hinxton)ENSG00000214897 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214897 [Gene_View]  chrX:153395639-153401420 [Contig_View]  PNMA6E [Vega]
ICGC DataPortalENSG00000214897
TCGA cBioPortalPNMA6E
AceView (NCBI)PNMA6E
Genatlas (Paris)PNMA6E
WikiGenes649238
SOURCE (Princeton)PNMA6E
Genetics Home Reference (NIH)PNMA6E
Genomic and cartography
GoldenPath hg38 (UCSC)PNMA6E  -     chrX:153395639-153401420 -  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PNMA6E  -     Xq28   [Description]    (hg19-Feb_2009)
EnsemblPNMA6E - Xq28 [CytoView hg19]  PNMA6E - Xq28 [CytoView hg38]
Mapping of homologs : NCBIPNMA6E [Mapview hg19]  PNMA6E [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX111592 HY005619 HY031436 HY051803
RefSeq transcript (Entrez)NM_001351293 NM_001351294
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PNMA6E
Cluster EST : UnigeneHs.112603 [ NCBI ]
CGAP (NCI)Hs.112603
Alternative Splicing GalleryENSG00000214897
Gene ExpressionPNMA6E [ NCBI-GEO ]   PNMA6E [ EBI - ARRAY_EXPRESS ]   PNMA6E [ SEEK ]   PNMA6E [ MEM ]
Gene Expression Viewer (FireBrowse)PNMA6E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)649238
GTEX Portal (Tissue expression)PNMA6E
Human Protein AtlasENSG00000214897-PNMA6E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PNMA6E
DMDM Disease mutations649238
Blocks (Seattle)PNMA6E
Human Protein Atlas [tissue]ENSG00000214897-PNMA6E [tissue]
IPIIPI00740527   
Protein Interaction databases
FunCoupENSG00000214897
BioGRIDPNMA6E
STRING (EMBL)PNMA6E
ZODIACPNMA6E
Ontologies - Pathways
Huge Navigator PNMA6E [HugePedia]
snp3D : Map Gene to Disease649238
BioCentury BCIQPNMA6E
ClinGenPNMA6E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD649238
Clinical trialPNMA6E
Miscellaneous
canSAR (ICR)PNMA6E (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePNMA6E
EVEXPNMA6E
GoPubMedPNMA6E
iHOPPNMA6E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:07:38 CET 2017

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