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POGZ (pogo transposable element derived with ZNF domain)

Identity

Alias (NCBI)MRD37
WHSUS
ZNF280E
ZNF635
ZNF635m
HGNC (Hugo) POGZ
HGNC Alias symbKIAA0461
ZNF635m
ZNF280E
HGNC Alias namezinc finger protein 280E
 putative protein product of Nbla00003
LocusID (NCBI) 23126
Atlas_Id 72045
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 151402724 and ends at 151442205 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
POGZ (1q21.3) / CHCHD3 (7q32.3)POGZ (1q21.3) / GBA (1q22)POGZ (1q21.3) / POGZ (1q21.3)
SLC25A4 (4q35.1) / POGZ (1q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)POGZ   18801
Cards
Entrez_Gene (NCBI)POGZ    pogo transposable element derived with ZNF domain
AliasesMRD37; WHSUS; ZNF280E; ZNF635; 
ZNF635m
GeneCards (Weizmann)POGZ
Ensembl hg19 (Hinxton)ENSG00000143442 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143442 [Gene_View]  ENSG00000143442 [Sequence]  chr1:151402724-151442205 [Contig_View]  POGZ [Vega]
ICGC DataPortalENSG00000143442
TCGA cBioPortalPOGZ
AceView (NCBI)POGZ
Genatlas (Paris)POGZ
SOURCE (Princeton)POGZ
Genetics Home Reference (NIH)POGZ
Genomic and cartography
GoldenPath hg38 (UCSC)POGZ  -     chr1:151402724-151442205 -  1q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)POGZ  -     1q21.3   [Description]    (hg19-Feb_2009)
GoldenPathPOGZ - 1q21.3 [CytoView hg19]  POGZ - 1q21.3 [CytoView hg38]
ImmunoBaseENSG00000143442
Genome Data Viewer NCBIPOGZ [Mapview hg19]  
OMIM614787   616364   
Gene and transcription
Genbank (Entrez)AB007930 AB037911 AB075477 AJ242979 AK000199
RefSeq transcript (Entrez)NM_001194937 NM_001194938 NM_015100 NM_145796 NM_207171
Consensus coding sequences : CCDS (NCBI)POGZ
Gene ExpressionPOGZ [ NCBI-GEO ]   POGZ [ EBI - ARRAY_EXPRESS ]   POGZ [ SEEK ]   POGZ [ MEM ]
Gene Expression Viewer (FireBrowse)POGZ [ Firebrowse - Broad ]
GenevisibleExpression of POGZ in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23126
GTEX Portal (Tissue expression)POGZ
Human Protein AtlasENSG00000143442-POGZ [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)POGZ
Human Protein Atlas [tissue]ENSG00000143442-POGZ [tissue]
HPRD11445
Protein Interaction databases
BioGRIDPOGZ
STRING (EMBL)POGZ
ZODIACPOGZ
Ontologies - Pathways
Litterature
PubMed81 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPOGZ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:16:41 CEST 2021

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