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POLR1H (RNA polymerase I subunit H)

Identity

Alias (NCBI)A12.2
HTEX-6
HTEX6
Rpa12
TCTEX6
TEX6
ZNRD1
ZR14
hZR14
tctex-6
HGNC (Hugo) POLR1H
HGNC Alias symbhZR14
HTEX-6
tctex-6
RPA12
A12.2
HGNC Previous nameZNRD1
HGNC Previous namezinc ribbon domain containing 1
LocusID (NCBI) 30834
Atlas_Id 43588
Location 6p22.1  [Link to chromosome band 6p22]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)POLR1H   13182
Cards
Entrez_Gene (NCBI)POLR1H    RNA polymerase I subunit H
AliasesA12.2; HTEX-6; HTEX6; Rpa12; 
TCTEX6; TEX6; ZNRD1; ZR14; hZR14; tctex-6
GeneCards (Weizmann)POLR1H
Ensembl hg19 (Hinxton)ENSG00000066379 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000066379 [Gene_View]  ENSG00000066379 [Sequence]  - [Contig_View]  POLR1H [Vega]
ICGC DataPortalENSG00000066379
TCGA cBioPortalPOLR1H
AceView (NCBI)POLR1H
Genatlas (Paris)POLR1H
SOURCE (Princeton)POLR1H
Genetics Home Reference (NIH)POLR1H
Genomic and cartography
GoldenPath hg38 (UCSC)POLR1H  -  
GoldenPath hg19 (UCSC)POLR1H  -  
GoldenPathPOLR1H - [CytoView hg19]  POLR1H - [CytoView hg38]
ImmunoBaseENSG00000066379
Genome Data Viewer NCBIPOLR1H [Mapview hg19]  
OMIM607525   
Gene and transcription
Genbank (Entrez)AF024616 AF024617 AF230337 AF238320 AF238321
RefSeq transcript (Entrez)NM_001278785 NM_001278786 NM_014596 NM_170783
Consensus coding sequences : CCDS (NCBI)POLR1H
Gene ExpressionPOLR1H [ NCBI-GEO ]   POLR1H [ EBI - ARRAY_EXPRESS ]   POLR1H [ SEEK ]   POLR1H [ MEM ]
Gene Expression Viewer (FireBrowse)POLR1H [ Firebrowse - Broad ]
GenevisibleExpression of POLR1H in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)30834
GTEX Portal (Tissue expression)POLR1H
Human Protein AtlasENSG00000066379-POLR1H [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P1U0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P1U0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P1U0
PhosPhoSitePlusQ9P1U0
Domaine pattern : Prosite (Expaxy)RNA_POL_M_15KD (PS01030)    ZF_TFIIS_1 (PS00466)    ZF_TFIIS_2 (PS51133)   
Domains : Interpro (EBI)DNA-dir_RNA_pol-M_15_CS    Rpa12/Rpb9/Rpc10/TFS    Zn_ribbon_RPA12_C    Znf_TFIIS   
Domain families : Pfam (Sanger)TFIIS_C (PF01096)   
Domain families : Pfam (NCBI)pfam01096   
Domain families : Smart (EMBL)ZnF_C2C2 (SM00440)  
Conserved Domain (NCBI)POLR1H
SuperfamilyQ9P1U0
AlphaFold pdb e-kbQ9P1U0   
Human Protein Atlas [tissue]ENSG00000066379-POLR1H [tissue]
HPRD09601
Protein Interaction databases
DIP (DOE-UCLA)Q9P1U0
IntAct (EBI)Q9P1U0
BioGRIDPOLR1H
STRING (EMBL)POLR1H
ZODIACPOLR1H
Ontologies - Pathways
QuickGOQ9P1U0
Ontology : AmiGOnucleic acid binding  DNA-directed 5'-3' RNA polymerase activity  protein binding  nucleoplasm  RNA polymerase I complex  nucleobase-containing compound metabolic process  transcription initiation from RNA polymerase I promoter  termination of RNA polymerase I transcription  termination of RNA polymerase I transcription  mRNA cleavage  zinc ion binding  positive regulation of gene expression, epigenetic  
Ontology : EGO-EBInucleic acid binding  DNA-directed 5'-3' RNA polymerase activity  protein binding  nucleoplasm  RNA polymerase I complex  nucleobase-containing compound metabolic process  transcription initiation from RNA polymerase I promoter  termination of RNA polymerase I transcription  termination of RNA polymerase I transcription  mRNA cleavage  zinc ion binding  positive regulation of gene expression, epigenetic  
NDEx NetworkPOLR1H
Atlas of Cancer Signalling NetworkPOLR1H
Wikipedia pathwaysPOLR1H
Orthology - Evolution
OrthoDB30834
GeneTree (enSembl)ENSG00000066379
Phylogenetic Trees/Animal Genes : TreeFamPOLR1H
Homologs : HomoloGenePOLR1H
Homology/Alignments : Family Browser (UCSC)POLR1H
Gene fusions - Rearrangements
Fusion : QuiverPOLR1H
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPOLR1H [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)POLR1H
dbVarPOLR1H
ClinVarPOLR1H
MonarchPOLR1H
1000_GenomesPOLR1H 
Exome Variant ServerPOLR1H
GNOMAD BrowserENSG00000066379
Varsome BrowserPOLR1H
ACMGPOLR1H variants
VarityQ9P1U0
Genomic Variants (DGV)POLR1H [DGVbeta]
DECIPHERPOLR1H [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPOLR1H 
Mutations
ICGC Data PortalPOLR1H 
TCGA Data PortalPOLR1H 
Broad Tumor PortalPOLR1H
OASIS PortalPOLR1H [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPOLR1H
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPOLR1H
DgiDB (Drug Gene Interaction Database)POLR1H
DoCM (Curated mutations)POLR1H
CIViC (Clinical Interpretations of Variants in Cancer)POLR1H
Cancer3DPOLR1H
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607525   
Orphanet
DisGeNETPOLR1H
MedgenPOLR1H
Genetic Testing Registry POLR1H
NextProtQ9P1U0 [Medical]
GENETestsPOLR1H
Target ValidationPOLR1H
Huge Navigator POLR1H [HugePedia]
ClinGenPOLR1H
Clinical trials, drugs, therapy
MyCancerGenomePOLR1H
Protein Interactions : CTDPOLR1H
Pharm GKB GenePA37754
PharosQ9P1U0
Clinical trialPOLR1H
Miscellaneous
canSAR (ICR)POLR1H
HarmonizomePOLR1H
DataMed IndexPOLR1H
Probes
Litterature
PubMed56 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPOLR1H
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:26:05 CEST 2021

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