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POLR3G (RNA polymerase III subunit G)

Identity

Alias_namespolymerase (RNA) III (DNA directed) polypeptide G (32kD)
Alias_symbol (synonym)RPC32
RPC7
Other alias
HGNC (Hugo) POLR3G
LocusID (NCBI) 10622
Atlas_Id 55969
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 89770681 and ends at 89810369 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)POLR3G   30075
Cards
Entrez_Gene (NCBI)POLR3G  10622  RNA polymerase III subunit G
AliasesRPC32; RPC7
GeneCards (Weizmann)POLR3G
Ensembl hg19 (Hinxton)ENSG00000113356 [Gene_View]  chr5:89770681-89810369 [Contig_View]  POLR3G [Vega]
Ensembl hg38 (Hinxton)ENSG00000113356 [Gene_View]  chr5:89770681-89810369 [Contig_View]  POLR3G [Vega]
ICGC DataPortalENSG00000113356
TCGA cBioPortalPOLR3G
AceView (NCBI)POLR3G
Genatlas (Paris)POLR3G
WikiGenes10622
SOURCE (Princeton)POLR3G
Genetics Home Reference (NIH)POLR3G
Genomic and cartography
GoldenPath hg19 (UCSC)POLR3G  -     chr5:89770681-89810369 +  5q14.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)POLR3G  -     5q14.3   [Description]    (hg38-Dec_2013)
EnsemblPOLR3G - 5q14.3 [CytoView hg19]  POLR3G - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBIPOLR3G [Mapview hg19]  POLR3G [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_006467
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)POLR3G
Cluster EST : UnigeneHs.282387 [ NCBI ]
CGAP (NCI)Hs.282387
Alternative Splicing GalleryENSG00000113356
Gene ExpressionPOLR3G [ NCBI-GEO ]   POLR3G [ EBI - ARRAY_EXPRESS ]   POLR3G [ SEEK ]   POLR3G [ MEM ]
Gene Expression Viewer (FireBrowse)POLR3G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10622
GTEX Portal (Tissue expression)POLR3G
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15318   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15318  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15318
Splice isoforms : SwissVarO15318
PhosPhoSitePlusO15318
Domains : Interpro (EBI)RNA_pol_III_Rpc31   
Domain families : Pfam (Sanger)RNA_pol_3_Rpc31 (PF11705)   
Domain families : Pfam (NCBI)pfam11705   
Conserved Domain (NCBI)POLR3G
DMDM Disease mutations10622
Blocks (Seattle)POLR3G
SuperfamilyO15318
Human Protein AtlasENSG00000113356
Peptide AtlasO15318
HPRD17881
IPIIPI00968202   IPI00007947   IPI00966624   IPI00965309   IPI00966318   IPI00966558   
Protein Interaction databases
DIP (DOE-UCLA)O15318
IntAct (EBI)O15318
FunCoupENSG00000113356
BioGRIDPOLR3G
STRING (EMBL)POLR3G
ZODIACPOLR3G
Ontologies - Pathways
QuickGOO15318
Ontology : AmiGOnuclear chromatin  RNA polymerase III activity  DNA-directed RNA polymerase activity  nucleoplasm  DNA-directed RNA polymerase III complex  cytosol  regulation of transcription from RNA polymerase III promoter  transcription initiation from RNA polymerase III promoter  cell proliferation  positive regulation of type I interferon production  positive regulation of interferon-beta production  innate immune response  positive regulation of innate immune response  defense response to virus  
Ontology : EGO-EBInuclear chromatin  RNA polymerase III activity  DNA-directed RNA polymerase activity  nucleoplasm  DNA-directed RNA polymerase III complex  cytosol  regulation of transcription from RNA polymerase III promoter  transcription initiation from RNA polymerase III promoter  cell proliferation  positive regulation of type I interferon production  positive regulation of interferon-beta production  innate immune response  positive regulation of innate immune response  defense response to virus  
Pathways : KEGGPurine metabolism    Pyrimidine metabolism    RNA polymerase    Cytosolic DNA-sensing pathway    Epstein-Barr virus infection   
NDEx NetworkPOLR3G
Atlas of Cancer Signalling NetworkPOLR3G
Wikipedia pathwaysPOLR3G
Orthology - Evolution
OrthoDB10622
GeneTree (enSembl)ENSG00000113356
Phylogenetic Trees/Animal Genes : TreeFamPOLR3G
HOVERGENO15318
HOGENOMO15318
Homologs : HomoloGenePOLR3G
Homology/Alignments : Family Browser (UCSC)POLR3G
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPOLR3G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)POLR3G
dbVarPOLR3G
ClinVarPOLR3G
1000_GenomesPOLR3G 
Exome Variant ServerPOLR3G
ExAC (Exome Aggregation Consortium)POLR3G (select the gene name)
Genetic variants : HAPMAP10622
Genomic Variants (DGV)POLR3G [DGVbeta]
DECIPHER (Syndromes)5:89770681-89810369  ENSG00000113356
CONAN: Copy Number AnalysisPOLR3G 
Mutations
ICGC Data PortalPOLR3G 
TCGA Data PortalPOLR3G 
Broad Tumor PortalPOLR3G
OASIS PortalPOLR3G [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPOLR3G  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPOLR3G
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch POLR3G
DgiDB (Drug Gene Interaction Database)POLR3G
DoCM (Curated mutations)POLR3G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)POLR3G (select a term)
intoGenPOLR3G
Cancer3DPOLR3G(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPOLR3G
Genetic Testing Registry POLR3G
NextProtO15318 [Medical]
TSGene10622
GENETestsPOLR3G
Huge Navigator POLR3G [HugePedia]
snp3D : Map Gene to Disease10622
BioCentury BCIQPOLR3G
ClinGenPOLR3G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10622
Chemical/Pharm GKB GenePA134986024
Clinical trialPOLR3G
Miscellaneous
canSAR (ICR)POLR3G (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePOLR3G
EVEXPOLR3G
GoPubMedPOLR3G
iHOPPOLR3G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:15:03 CEST 2017

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