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POLR3GL (RNA polymerase III subunit G like)

Identity

Alias_namespolymerase (RNA) III (DNA directed) polypeptide G (32kD)-like
Alias_symbol (synonym)flj32422
MGC3200
Other aliasRPC32HOM
HGNC (Hugo) POLR3GL
LocusID (NCBI) 84265
Atlas_Id 72060
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 145964682 and ends at 145978848 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)POLR3GL   28466
Cards
Entrez_Gene (NCBI)POLR3GL  84265  RNA polymerase III subunit G like
AliasesRPC32HOM; flj32422
GeneCards (Weizmann)POLR3GL
Ensembl hg19 (Hinxton)ENSG00000121851 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000121851 [Gene_View]  chr1:145964682-145978848 [Contig_View]  POLR3GL [Vega]
ICGC DataPortalENSG00000121851
TCGA cBioPortalPOLR3GL
AceView (NCBI)POLR3GL
Genatlas (Paris)POLR3GL
WikiGenes84265
SOURCE (Princeton)POLR3GL
Genetics Home Reference (NIH)POLR3GL
Genomic and cartography
GoldenPath hg38 (UCSC)POLR3GL  -     chr1:145964682-145978848 +  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)POLR3GL  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblPOLR3GL - 1q21.1 [CytoView hg19]  POLR3GL - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIPOLR3GL [Mapview hg19]  POLR3GL [Mapview hg38]
OMIM617457   
Gene and transcription
Genbank (Entrez)AK056984 AK092209 BC004355 BC050418 BI914801
RefSeq transcript (Entrez)NM_001330685 NM_032305
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)POLR3GL
Cluster EST : UnigeneHs.591456 [ NCBI ]
CGAP (NCI)Hs.591456
Alternative Splicing GalleryENSG00000121851
Gene ExpressionPOLR3GL [ NCBI-GEO ]   POLR3GL [ EBI - ARRAY_EXPRESS ]   POLR3GL [ SEEK ]   POLR3GL [ MEM ]
Gene Expression Viewer (FireBrowse)POLR3GL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84265
GTEX Portal (Tissue expression)POLR3GL
Human Protein AtlasENSG00000121851-POLR3GL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BT43   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BT43  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BT43
Splice isoforms : SwissVarQ9BT43
PhosPhoSitePlusQ9BT43
Domains : Interpro (EBI)RNA_pol_III_Rpc31   
Domain families : Pfam (Sanger)RNA_pol_3_Rpc31 (PF11705)   
Domain families : Pfam (NCBI)pfam11705   
Conserved Domain (NCBI)POLR3GL
DIDm Disease mutations=a hef9 http://bioinf.umbc.edu/dmdm/gene_prot_page.php?search_type=gene&id=84265 TARGET=DMDM>84265
Blocks (Seattle)POLR3GL
SuperfamilyQ9BT43
Human Protein Atlas [tissue]ENSG00000121851-POLR3GL [tissue]
Peptide AtlasQ9BT43
HPRD14546
IPIIPI00031117   IPI00645999   
Protein Interaction databases
DIP (DOE-UCLA)Q9BT43
IntAct (EBI)Q9BT43
FunCoupENSG00000121851
BioGRIDPOLR3GL
STRING (EMBL)POLR3GL
ZODIACPOLR3GL
Ontologies - Pathways
QuickGOQ9BT43
Ontology : AmiGOnuclear chromatin  protein binding  nucleoplasm  DNA-directed RNA polymerase III complex  cytosol  transcription from RNA polymerase III promoter  positive regulation of type I interferon production  
Ontology : EGO-EBInuclear chromatin  protein binding  nucleoplasm  DNA-directed RNA polymerase III complex  cytosol  transcription from RNA polymerase III promoter  positive regulation of type I interferon production  
Pathways : KEGGPurine metabolism    Pyrimidine metabolism    RNA polymerase    Cytosolic DNA-sensing pathway    Epstein-Barr virus infection   
NDEx NetworkPOLR3GL
Atlas of Cancer Signalling NetworkPOLR3GL
Wikipedia pathwaysPOLR3GL
Orthology - Evolution
OrthoDB84265
GeneTree (enSembl)ENSG00000121851
Phylogenetic Trees/Animal Genes : TreeFamPOLR3GL
HOVERGENQ9BT43
HOGENOMQ9BT43
Homologs : HomoloGenePOLR3GL
Homology/Alignments : Family Browser (UCSC)POLR3GL
Gene fusions - Rearrangements
Tumor Fusion PortalPOLR3GL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPOLR3GL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)POLR3GL
dbVarPOLR3GL
ClinVarPOLR3GL
1000_GenomesPOLR3GL 
Exome Variant ServerPOLR3GL
ExAC (Exome Aggregation Consortium)ENSG00000121851
GNOMAD BrowserENSG00000121851
Genetic variants : HAPMAP84265
Genomic Variants (DGV)POLR3GL [DGVbeta]
DECIPHERPOLR3GL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPOLR3GL 
Mutations
ICGC Data PortalPOLR3GL 
TCGA Data PortalPOLR3GL 
Broad Tumor PortalPOLR3GL
OASIS PortalPOLR3GL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPOLR3GL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPOLR3GL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch POLR3GL
DgiDB (Drug Gene Interaction Database)POLR3GL
DoCM (Curated mutations)POLR3GL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)POLR3GL (select a term)
intoGenPOLR3GL
Cancer3DPOLR3GL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617457   
Orphanet
DisGeNETPOLR3GL
MedgenPOLR3GL
Genetic Testing Registry POLR3GL
NextProtQ9BT43 [Medical]
TSGene84265
GENETestsPOLR3GL
Target ValidationPOLR3GL
Huge Navigator POLR3GL [HugePedia]
snp3D : Map Gene to Disease84265
BioCentury BCIQPOLR3GL
ClinGenPOLR3GL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84265
Chemical/Pharm GKB GenePA134921690
Clinical trialPOLR3GL
Miscellaneous
canSAR (ICR)POLR3GL (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePOLR3GL
EVEXPOLR3GL
GoPubMedPOLR3GL
iHOPPOLR3GL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:07:45 CET 2017

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