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POTEA (POTE ankyrin domain family member A)

Identity

Alias_namesA26A1
ANKRD26-like family A, member 1
POTE ankyrin domain family, member A
Alias_symbol (synonym)POTE8
POTE-8
CT104.3
Other alias
HGNC (Hugo) POTEA
LocusID (NCBI) 340441
Atlas_Id 72079
Location 8p11.1  [Link to chromosome band 8p11]
Location_base_pair Starts at 43292442 and ends at 43363185 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)POTEA   33893
Cards
Entrez_Gene (NCBI)POTEA  340441  POTE ankyrin domain family member A
AliasesA26A1; CT104.3; POTE-8; POTE8
GeneCards (Weizmann)POTEA
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:43292442-43363185 [Contig_View]  POTEA [Vega]
TCGA cBioPortalPOTEA
AceView (NCBI)POTEA
Genatlas (Paris)POTEA
WikiGenes340441
SOURCE (Princeton)POTEA
Genetics Home Reference (NIH)POTEA
Genomic and cartography
GoldenPath hg38 (UCSC)POTEA  -     chr8:43292442-43363185 +  8p11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)POTEA  -     8p11.1   [Description]    (hg19-Feb_2009)
EnsemblPOTEA - 8p11.1 [CytoView hg19]  POTEA - 8p11.1 [CytoView hg38]
Mapping of homologs : NCBIPOTEA [Mapview hg19]  POTEA [Mapview hg38]
OMIM608915   
Gene and transcription
Genbank (Entrez)AY462869 AY462870 BC148508 BC153076
RefSeq transcript (Entrez)NM_001002920 NM_001005365
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)POTEA
Cluster EST : UnigeneHs.531579 [ NCBI ]
CGAP (NCI)Hs.531579
Gene ExpressionPOTEA [ NCBI-GEO ]   POTEA [ EBI - ARRAY_EXPRESS ]   POTEA [ SEEK ]   POTEA [ MEM ]
Gene Expression Viewer (FireBrowse)POTEA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340441
GTEX Portal (Tissue expression)POTEA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6S8J7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6S8J7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6S8J7
Splice isoforms : SwissVarQ6S8J7
PhosPhoSitePlusQ6S8J7
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00023    pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)POTEA
DMDM Disease mutations340441
Blocks (Seattle)POTEA
SuperfamilyQ6S8J7
Peptide AtlasQ6S8J7
HPRD12330
IPIIPI00478326   IPI00470364   
Protein Interaction databases
DIP (DOE-UCLA)Q6S8J7
IntAct (EBI)Q6S8J7
BioGRIDPOTEA
STRING (EMBL)POTEA
ZODIACPOTEA
Ontologies - Pathways
QuickGOQ6S8J7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPOTEA
Atlas of Cancer Signalling NetworkPOTEA
Wikipedia pathwaysPOTEA
Orthology - Evolution
OrthoDB340441
Phylogenetic Trees/Animal Genes : TreeFamPOTEA
HOVERGENQ6S8J7
HOGENOMQ6S8J7
Homologs : HomoloGenePOTEA
Homology/Alignments : Family Browser (UCSC)POTEA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPOTEA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)POTEA
dbVarPOTEA
ClinVarPOTEA
1000_GenomesPOTEA 
Exome Variant ServerPOTEA
ExAC (Exome Aggregation Consortium)POTEA (select the gene name)
Genetic variants : HAPMAP340441
Genomic Variants (DGV)POTEA [DGVbeta]
DECIPHERPOTEA [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPOTEA 
Mutations
ICGC Data PortalPOTEA 
TCGA Data PortalPOTEA 
Broad Tumor PortalPOTEA
OASIS PortalPOTEA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPOTEA  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPOTEA
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch POTEA
DgiDB (Drug Gene Interaction Database)POTEA
DoCM (Curated mutations)POTEA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)POTEA (select a term)
intoGenPOTEA
Cancer3DPOTEA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608915   
Orphanet
MedgenPOTEA
Genetic Testing Registry POTEA
NextProtQ6S8J7 [Medical]
TSGene340441
GENETestsPOTEA
Target ValidationPOTEA
Huge Navigator POTEA [HugePedia]
snp3D : Map Gene to Disease340441
BioCentury BCIQPOTEA
ClinGenPOTEA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340441
Chemical/Pharm GKB GenePA164724701
Clinical trialPOTEA
Miscellaneous
canSAR (ICR)POTEA (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePOTEA
EVEXPOTEA
GoPubMedPOTEA
iHOPPOTEA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:34:58 CEST 2017

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