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POTEB (POTE ankyrin domain family member B)

Identity

Alias_namesA26B1
ANKRD26-like family B, member 1
POTE ankyrin domain family, member B
Alias_symbol (synonym)POTE15
POTE-15
CT104.5
Other alias
HGNC (Hugo) POTEB
LocusID (NCBI) 100996331
Atlas_Id 72080
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 20835372 and ends at 20866314 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)POTEB   33734
Cards
Entrez_Gene (NCBI)POTEB  100996331  POTE ankyrin domain family member B
AliasesA26B1; CT104.5; POTE-15; POTE15
GeneCards (Weizmann)POTEB
Ensembl hg19 (Hinxton)ENSG00000233917 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233917 [Gene_View]  chr15:20835372-20866314 [Contig_View]  POTEB [Vega]
ICGC DataPortalENSG00000233917
TCGA cBioPortalPOTEB
AceView (NCBI)POTEB
Genatlas (Paris)POTEB
WikiGenes100996331
SOURCE (Princeton)POTEB
Genetics Home Reference (NIH)POTEB
Genomic and cartography
GoldenPath hg38 (UCSC)POTEB  -     chr15:20835372-20866314 -  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)POTEB  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblPOTEB - 15q11.2 [CytoView hg19]  POTEB - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIPOTEB [Mapview hg19]  POTEB [Mapview hg38]
OMIM608912   
Gene and transcription
Genbank (Entrez)BC101007
RefSeq transcript (Entrez)NM_001277304
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)POTEB
Cluster EST : UnigeneHs.722659 [ NCBI ]
CGAP (NCI)Hs.722659
Alternative Splicing GalleryENSG00000233917
Gene ExpressionPOTEB [ NCBI-GEO ]   POTEB [ EBI - ARRAY_EXPRESS ]   POTEB [ SEEK ]   POTEB [ MEM ]
Gene Expression Viewer (FireBrowse)POTEB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100996331
GTEX Portal (Tissue expression)POTEB
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6S5H4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6S5H4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6S5H4
Splice isoforms : SwissVarQ6S5H4
PhosPhoSitePlusQ6S5H4
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)POTEB
DMDM Disease mutations100996331
Blocks (Seattle)POTEB
SuperfamilyQ6S5H4
Human Protein AtlasENSG00000233917
Peptide AtlasQ6S5H4
Protein Interaction databases
DIP (DOE-UCLA)Q6S5H4
IntAct (EBI)Q6S5H4
FunCoupENSG00000233917
BioGRIDPOTEB
STRING (EMBL)POTEB
ZODIACPOTEB
Ontologies - Pathways
QuickGOQ6S5H4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPOTEB
Atlas of Cancer Signalling NetworkPOTEB
Wikipedia pathwaysPOTEB
Orthology - Evolution
OrthoDB100996331
GeneTree (enSembl)ENSG00000233917
Phylogenetic Trees/Animal Genes : TreeFamPOTEB
HOVERGENQ6S5H4
HOGENOMQ6S5H4
Homologs : HomoloGenePOTEB
Homology/Alignments : Family Browser (UCSC)POTEB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPOTEB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)POTEB
dbVarPOTEB
ClinVarPOTEB
1000_GenomesPOTEB 
Exome Variant ServerPOTEB
ExAC (Exome Aggregation Consortium)POTEB (select the gene name)
Genetic variants : HAPMAP100996331
Genomic Variants (DGV)POTEB [DGVbeta]
DECIPHERPOTEB [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPOTEB 
Mutations
ICGC Data PortalPOTEB 
TCGA Data PortalPOTEB 
Broad Tumor PortalPOTEB
OASIS PortalPOTEB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPOTEB  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPOTEB
BioMutasearch POTEB
DgiDB (Drug Gene Interaction Database)POTEB
DoCM (Curated mutations)POTEB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)POTEB (select a term)
intoGenPOTEB
Cancer3DPOTEB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608912   
Orphanet
MedgenPOTEB
Genetic Testing Registry POTEB
NextProtQ6S5H4 [Medical]
TSGene100996331
GENETestsPOTEB
Huge Navigator POTEB [HugePedia]
snp3D : Map Gene to Disease100996331
BioCentury BCIQPOTEB
ClinGenPOTEB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996331
Chemical/Pharm GKB GenePA164724702
Clinical trialPOTEB
Miscellaneous
canSAR (ICR)POTEB (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePOTEB
EVEXPOTEB
GoPubMedPOTEB
iHOPPOTEB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:49:12 CEST 2017

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