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POTEB2 (POTE ankyrin domain family, member B2)

Identity

Alias_namesPOTE ankyrin domain family, member B2
Other alias-
HGNC (Hugo) POTEB2
LocusID (NCBI) 100287399
Atlas_Id 72081
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 21040701 and ends at 21071643 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)POTEB2   48327
Cards
Entrez_Gene (NCBI)POTEB2  100287399  POTE ankyrin domain family, member B2
Aliases
GeneCards (Weizmann)POTEB2
Ensembl hg19 (Hinxton)ENSG00000230031 [Gene_View]  chr15:21040701-21071643 [Contig_View]  POTEB2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000230031 [Gene_View]  chr15:21040701-21071643 [Contig_View]  POTEB2 [Vega]
ICGC DataPortalENSG00000230031
TCGA cBioPortalPOTEB2
AceView (NCBI)POTEB2
Genatlas (Paris)POTEB2
WikiGenes100287399
SOURCE (Princeton)POTEB2
Genetics Home Reference (NIH)POTEB2
Genomic and cartography
GoldenPath hg19 (UCSC)POTEB2  -     chr15:21040701-21071643 -  15q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)POTEB2  -     15q11.2   [Description]    (hg38-Dec_2013)
EnsemblPOTEB2 - 15q11.2 [CytoView hg19]  POTEB2 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIPOTEB2 [Mapview hg19]  POTEB2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC101007
RefSeq transcript (Entrez)NM_001277303
RefSeq genomic (Entrez)NC_000015 NT_037852
Consensus coding sequences : CCDS (NCBI)POTEB2
Cluster EST : UnigeneHs.722659 [ NCBI ]
CGAP (NCI)Hs.722659
Alternative Splicing GalleryENSG00000230031
Gene ExpressionPOTEB2 [ NCBI-GEO ]   POTEB2 [ EBI - ARRAY_EXPRESS ]   POTEB2 [ SEEK ]   POTEB2 [ MEM ]
Gene Expression Viewer (FireBrowse)POTEB2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100287399
GTEX Portal (Tissue expression)POTEB2
Protein : pattern, domain, 3D structure
UniProt/SwissProtH3BUK9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtH3BUK9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProH3BUK9
Splice isoforms : SwissVarH3BUK9
PhosPhoSitePlusH3BUK9
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00023    pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)POTEB2
DMDM Disease mutations100287399
Blocks (Seattle)POTEB2
SuperfamilyH3BUK9
Human Protein AtlasENSG00000230031
Peptide AtlasH3BUK9
IPIIPI00985222   
Protein Interaction databases
DIP (DOE-UCLA)H3BUK9
IntAct (EBI)H3BUK9
FunCoupENSG00000230031
BioGRIDPOTEB2
STRING (EMBL)POTEB2
ZODIACPOTEB2
Ontologies - Pathways
QuickGOH3BUK9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPOTEB2
Atlas of Cancer Signalling NetworkPOTEB2
Wikipedia pathwaysPOTEB2
Orthology - Evolution
OrthoDB100287399
GeneTree (enSembl)ENSG00000230031
Phylogenetic Trees/Animal Genes : TreeFamPOTEB2
HOVERGENH3BUK9
HOGENOMH3BUK9
Homologs : HomoloGenePOTEB2
Homology/Alignments : Family Browser (UCSC)POTEB2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPOTEB2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)POTEB2
dbVarPOTEB2
ClinVarPOTEB2
1000_GenomesPOTEB2 
Exome Variant ServerPOTEB2
ExAC (Exome Aggregation Consortium)POTEB2 (select the gene name)
Genetic variants : HAPMAP100287399
Genomic Variants (DGV)POTEB2 [DGVbeta]
DECIPHER (Syndromes)15:21040701-21071643  ENSG00000230031
CONAN: Copy Number AnalysisPOTEB2 
Mutations
ICGC Data PortalPOTEB2 
TCGA Data PortalPOTEB2 
Broad Tumor PortalPOTEB2
OASIS PortalPOTEB2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPOTEB2
BioMutasearch POTEB2
DgiDB (Drug Gene Interaction Database)POTEB2
DoCM (Curated mutations)POTEB2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)POTEB2 (select a term)
intoGenPOTEB2
Cancer3DPOTEB2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPOTEB2
Genetic Testing Registry POTEB2
NextProtH3BUK9 [Medical]
TSGene100287399
GENETestsPOTEB2
Huge Navigator POTEB2 [HugePedia]
snp3D : Map Gene to Disease100287399
BioCentury BCIQPOTEB2
ClinGenPOTEB2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287399
Clinical trialPOTEB2
Miscellaneous
canSAR (ICR)POTEB2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePOTEB2
EVEXPOTEB2
GoPubMedPOTEB2
iHOPPOTEB2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:39:13 CET 2017

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