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POTEI (POTE ankyrin domain family member I)

Identity

Alias_namesPOTE ankyrin domain family, member I
Alias_symbol (synonym)POTE2beta
Other alias
HGNC (Hugo) POTEI
LocusID (NCBI) 653269
Atlas_Id 72090
Location 2q21.1  [Link to chromosome band 2q21]
Location_base_pair Starts at 130462816 and ends at 130509235 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)POTEI   37093
Cards
Entrez_Gene (NCBI)POTEI  653269  POTE ankyrin domain family member I
AliasesPOTE2beta
GeneCards (Weizmann)POTEI
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:130462816-130509235 [Contig_View]  POTEI [Vega]
TCGA cBioPortalPOTEI
AceView (NCBI)POTEI
Genatlas (Paris)POTEI
WikiGenes653269
SOURCE (Princeton)POTEI
Genetics Home Reference (NIH)POTEI
Genomic and cartography
GoldenPath hg38 (UCSC)POTEI  -     chr2:130462816-130509235 -  2q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)POTEI  -     2q21.1   [Description]    (hg19-Feb_2009)
EnsemblPOTEI - 2q21.1 [CytoView hg19]  POTEI - 2q21.1 [CytoView hg38]
Mapping of homologs : NCBIPOTEI [Mapview hg19]  POTEI [Mapview hg38]
Gene and transcription
Genbank (Entrez)HM358987
RefSeq transcript (Entrez)NM_001277406
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)POTEI
Cluster EST : UnigeneHs.558782 [ NCBI ]
CGAP (NCI)Hs.558782
Gene ExpressionPOTEI [ NCBI-GEO ]   POTEI [ EBI - ARRAY_EXPRESS ]   POTEI [ SEEK ]   POTEI [ MEM ]
Gene Expression Viewer (FireBrowse)POTEI [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653269
GTEX Portal (Tissue expression)POTEI
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CG38   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CG38  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CG38
Splice isoforms : SwissVarP0CG38
PhosPhoSitePlusP0CG38
Domaine pattern : Prosite (Expaxy)ACTINS_2 (PS00432)    ACTINS_ACT_LIKE (PS01132)    ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Actin    Actin/actin-like_CS    Actin_CS    Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Actin (PF00022)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00022    pfam12796   
Domain families : Smart (EMBL)ACTIN (SM00268)  ANK (SM00248)  
Conserved Domain (NCBI)POTEI
DMDM Disease mutations653269
Blocks (Seattle)POTEI
SuperfamilyP0CG38
Peptide AtlasP0CG38
IPIIPI00740545   IPI00970839   IPI00970800   IPI00970813   IPI00970894   IPI00555675   IPI00970822   IPI00970831   IPI00970942   IPI00970912   IPI00885048   IPI00970948   IPI00970825   IPI00970937   IPI00970943   IPI00970910   IPI00556212   IPI00970848   IPI00748022   IPI00970938   IPI00970898   IPI00970952   
Protein Interaction databases
DIP (DOE-UCLA)P0CG38
IntAct (EBI)P0CG38
BioGRIDPOTEI
STRING (EMBL)POTEI
ZODIACPOTEI
Ontologies - Pathways
QuickGOP0CG38
Ontology : AmiGOretina homeostasis  molecular_function  extracellular space  extracellular exosome  
Ontology : EGO-EBIretina homeostasis  molecular_function  extracellular space  extracellular exosome  
NDEx NetworkPOTEI
Atlas of Cancer Signalling NetworkPOTEI
Wikipedia pathwaysPOTEI
Orthology - Evolution
OrthoDB653269
Phylogenetic Trees/Animal Genes : TreeFamPOTEI
HOVERGENP0CG38
HOGENOMP0CG38
Homologs : HomoloGenePOTEI
Homology/Alignments : Family Browser (UCSC)POTEI
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPOTEI [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)POTEI
dbVarPOTEI
ClinVarPOTEI
1000_GenomesPOTEI 
Exome Variant ServerPOTEI
ExAC (Exome Aggregation Consortium)POTEI (select the gene name)
Genetic variants : HAPMAP653269
Genomic Variants (DGV)POTEI [DGVbeta]
DECIPHERPOTEI [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPOTEI 
Mutations
ICGC Data PortalPOTEI 
TCGA Data PortalPOTEI 
Broad Tumor PortalPOTEI
OASIS PortalPOTEI [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPOTEI  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPOTEI
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch POTEI
DgiDB (Drug Gene Interaction Database)POTEI
DoCM (Curated mutations)POTEI (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)POTEI (select a term)
intoGenPOTEI
Cancer3DPOTEI(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPOTEI
Genetic Testing Registry POTEI
NextProtP0CG38 [Medical]
TSGene653269
GENETestsPOTEI
Target ValidationPOTEI
Huge Navigator POTEI [HugePedia]
snp3D : Map Gene to Disease653269
BioCentury BCIQPOTEI
ClinGenPOTEI
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653269
Chemical/Pharm GKB GenePA165697301
Clinical trialPOTEI
Miscellaneous
canSAR (ICR)POTEI (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePOTEI
EVEXPOTEI
GoPubMedPOTEI
iHOPPOTEI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:36:57 CEST 2017

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