Atlas of Genetics and Cytogenetics in Oncology and Haematology


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POU5F1P3 (POU class 5 homeobox 1 pseudogene 3)

Identity

Alias_namesOTF3L
POU5F1L
POU domain, class 5, transcription factor 1-like
POU domain class 5, transcription factor 1 pseudogene 3
Alias_symbol (synonym)POU5FLC12
Other aliasOCT4-pg3
HGNC (Hugo) POU5F1P3
LocusID (NCBI) 642559
Atlas_Id 43583
Location 12p13.31  [Link to chromosome band 12p13]
Location_base_pair Starts at 8286365 and ends at 8287448 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)POU5F1P3   9222
Cards
Entrez_Gene (NCBI)POU5F1P3  642559  POU class 5 homeobox 1 pseudogene 3
AliasesOCT4-pg3; OTF3L; POU5F1L; POU5FLC12
GeneCards (Weizmann)POU5F1P3
Ensembl hg19 (Hinxton)ENSG00000235602 [Gene_View]  chr12:8286365-8287448 [Contig_View]  POU5F1P3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000235602 [Gene_View]  chr12:8286365-8287448 [Contig_View]  POU5F1P3 [Vega]
ICGC DataPortalENSG00000235602
TCGA cBioPortalPOU5F1P3
AceView (NCBI)POU5F1P3
Genatlas (Paris)POU5F1P3
WikiGenes642559
SOURCE (Princeton)POU5F1P3
Genetics Home Reference (NIH)POU5F1P3
Genomic and cartography
GoldenPath hg19 (UCSC)POU5F1P3  -     chr12:8286365-8287448 -  12p13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)POU5F1P3  -     12p13.31   [Description]    (hg38-Dec_2013)
EnsemblPOU5F1P3 - 12p13.31 [CytoView hg19]  POU5F1P3 - 12p13.31 [CytoView hg38]
Mapping of homologs : NCBIPOU5F1P3 [Mapview hg19]  POU5F1P3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF268617 FM177983 FM177984 FM177985 FM177987
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000012 NC_018923 NG_005793 NG_023971 NT_009714 NW_004929383
Consensus coding sequences : CCDS (NCBI)POU5F1P3
Cluster EST : UnigeneHs.646545 [ NCBI ]
CGAP (NCI)Hs.646545
Alternative Splicing GalleryENSG00000235602
Gene ExpressionPOU5F1P3 [ NCBI-GEO ]   POU5F1P3 [ EBI - ARRAY_EXPRESS ]   POU5F1P3 [ SEEK ]   POU5F1P3 [ MEM ]
Gene Expression Viewer (FireBrowse)POU5F1P3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)642559
GTEX Portal (Tissue expression)POU5F1P3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)POU5F1P3
DMDM Disease mutations642559
Blocks (Seattle)POU5F1P3
Human Protein AtlasENSG00000235602
Protein Interaction databases
FunCoupENSG00000235602
BioGRIDPOU5F1P3
STRING (EMBL)POU5F1P3
ZODIACPOU5F1P3
Ontologies - Pathways
Huge Navigator POU5F1P3 [HugePedia]
snp3D : Map Gene to Disease642559
BioCentury BCIQPOU5F1P3
ClinGenPOU5F1P3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642559
Clinical trialPOU5F1P3
Miscellaneous
canSAR (ICR)POU5F1P3 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePOU5F1P3
EVEXPOU5F1P3
GoPubMedPOU5F1P3
iHOPPOU5F1P3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:15:08 CEST 2017

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