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POU5F1P5 (POU class 5 homeobox 1 pseudogene 5)

Identity

Alias (NCBI)Oct4-pg5
HGNC (Hugo) POU5F1P5
HGNC Alias symbOct4-pg5
HGNC Previous namePOU domain class 5, transcription factor 1 pseudogene 5
LocusID (NCBI) 100009667
Atlas_Id 55641
Location 10q21.3  [Link to chromosome band 10q21]
Location_base_pair Starts at 68009947 and ends at 68010883 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)POU5F1P5   33311
Cards
Entrez_Gene (NCBI)POU5F1P5    POU class 5 homeobox 1 pseudogene 5
AliasesOct4-pg5
GeneCards (Weizmann)POU5F1P5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:68009947-68010883 [Contig_View]  POU5F1P5 [Vega]
TCGA cBioPortalPOU5F1P5
AceView (NCBI)POU5F1P5
Genatlas (Paris)POU5F1P5
SOURCE (Princeton)POU5F1P5
Genetics Home Reference (NIH)POU5F1P5
Genomic and cartography
GoldenPath hg38 (UCSC)POU5F1P5  -     chr10:68009947-68010883 -  10q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)POU5F1P5  -     10q21.3   [Description]    (hg19-Feb_2009)
GoldenPathPOU5F1P5 - 10q21.3 [CytoView hg19]  POU5F1P5 - 10q21.3 [CytoView hg38]
genome Data Viewer NCBIPOU5F1P5 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)CA392694
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)POU5F1P5
Gene ExpressionPOU5F1P5 [ NCBI-GEO ]   POU5F1P5 [ EBI - ARRAY_EXPRESS ]   POU5F1P5 [ SEEK ]   POU5F1P5 [ MEM ]
Gene Expression Viewer (FireBrowse)POU5F1P5 [ Firebrowse - Broad ]
GenevisibleExpression of POU5F1P5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100009667
GTEX Portal (Tissue expression)POU5F1P5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)POU5F1P5
Blocks (Seattle)POU5F1P5
Protein Interaction databases
BioGRIDPOU5F1P5
STRING (EMBL)POU5F1P5
ZODIACPOU5F1P5
Ontologies - Pathways
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPOU5F1P5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jan 1 18:32:22 CET 2021

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