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POU5F1P5 (POU class 5 homeobox 1 pseudogene 5)

Identity

Alias_namesPOU domain class 5
Alias_symbol (synonym)Oct4-pg5
Other alias
HGNC (Hugo) POU5F1P5
LocusID (NCBI) 100009667
Atlas_Id 55641
Location 10q21.3  [Link to chromosome band 10q21]
Location_base_pair Starts at 68009947 and ends at 68010883 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)POU5F1P5   33311
Cards
Entrez_Gene (NCBI)POU5F1P5  100009667  POU class 5 homeobox 1 pseudogene 5
AliasesOct4-pg5
GeneCards (Weizmann)POU5F1P5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:68009947-68010883 [Contig_View]  POU5F1P5 [Vega]
TCGA cBioPortalPOU5F1P5
AceView (NCBI)POU5F1P5
Genatlas (Paris)POU5F1P5
WikiGenes100009667
SOURCE (Princeton)POU5F1P5
Genetics Home Reference (NIH)POU5F1P5
Genomic and cartography
GoldenPath hg38 (UCSC)POU5F1P5  -     chr10:68009947-68010883 -  10q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)POU5F1P5  -     10q21.3   [Description]    (hg19-Feb_2009)
EnsemblPOU5F1P5 - 10q21.3 [CytoView hg19]  POU5F1P5 - 10q21.3 [CytoView hg38]
Mapping of homologs : NCBIPOU5F1P5 [Mapview hg19]  POU5F1P5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CA392694
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)POU5F1P5
Gene ExpressionPOU5F1P5 [ NCBI-GEO ]   POU5F1P5 [ EBI - ARRAY_EXPRESS ]   POU5F1P5 [ SEEK ]   POU5F1P5 [ MEM ]
Gene Expression Viewer (FireBrowse)POU5F1P5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100009667
GTEX Portal (Tissue expression)POU5F1P5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)POU5F1P5
DMDM Disease mutations100009667
Blocks (Seattle)POU5F1P5
Protein Interaction databases
BioGRIDPOU5F1P5
STRING (EMBL)POU5F1P5
ZODIACPOU5F1P5
Ontologies - Pathways
Huge Navigator POU5F1P5 [HugePedia]
snp3D : Map Gene to Disease100009667
BioCentury BCIQPOU5F1P5
ClinGenPOU5F1P5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100009667
Clinical trialPOU5F1P5
Miscellaneous
canSAR (ICR)POU5F1P5 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePOU5F1P5
EVEXPOU5F1P5
GoPubMedPOU5F1P5
iHOPPOU5F1P5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:31:24 CET 2018

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