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PP7080 (uncharacterized LOC25845)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 25845
Atlas_Id 72108
Location 5p15.33  [Link to chromosome band 5p15]
Location_base_pair Starts at 470510 and ends at 472965 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)PP7080  25845  uncharacterized LOC25845
Aliases
GeneCards (Weizmann)PP7080
Ensembl hg19 (Hinxton)ENSG00000188242 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188242 [Gene_View]  chr5:470510-472965 [Contig_View]  PP7080 [Vega]
ICGC DataPortalENSG00000188242
TCGA cBioPortalPP7080
AceView (NCBI)PP7080
Genatlas (Paris)PP7080
WikiGenes25845
SOURCE (Princeton)PP7080
Genetics Home Reference (NIH)PP7080
Genomic and cartography
GoldenPath hg38 (UCSC)PP7080  -     chr5:470510-472965 -  5p15.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PP7080  -     5p15.33   [Description]    (hg19-Feb_2009)
EnsemblPP7080 - 5p15.33 [CytoView hg19]  PP7080 - 5p15.33 [CytoView hg38]
Mapping of homologs : NCBIPP7080 [Mapview hg19]  PP7080 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF370427 BC045808 BC072677 BC086861
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PP7080
Cluster EST : UnigeneHs.719132 [ NCBI ]
CGAP (NCI)Hs.719132
Alternative Splicing GalleryENSG00000188242
Gene ExpressionPP7080 [ NCBI-GEO ]   PP7080 [ EBI - ARRAY_EXPRESS ]   PP7080 [ SEEK ]   PP7080 [ MEM ]
Gene Expression Viewer (FireBrowse)PP7080 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)25845
GTEX Portal (Tissue expression)PP7080
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PP7080
DMDM Disease mutations25845
Blocks (Seattle)PP7080
Human Protein AtlasENSG00000188242
IPIIPI00401082   IPI00966102   
Protein Interaction databases
FunCoupENSG00000188242
BioGRIDPP7080
STRING (EMBL)PP7080
ZODIACPP7080
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease25845
BioCentury BCIQPP7080
ClinGenPP7080
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25845
Clinical trialPP7080
Miscellaneous
canSAR (ICR)PP7080 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePP7080
EVEXPP7080
GoPubMedPP7080
iHOPPP7080
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:37:01 CEST 2017

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