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PPBPP2 (pro-platelet basic protein pseudogene 2)

Identity

Alias_namesPPBPL2
pro-platelet basic protein-like 2
Alias_symbol (synonym)SPBPBP
Other alias
HGNC (Hugo) PPBPP2
LocusID (NCBI) 10895
Atlas_Id 72116
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 74054360 and ends at 74055322 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPBPP2   16981
Cards
Entrez_Gene (NCBI)PPBPP2  10895  pro-platelet basic protein pseudogene 2
AliasesPPBPL2; SPBPBP
GeneCards (Weizmann)PPBPP2
Ensembl hg19 (Hinxton)ENSG00000248848 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248848 [Gene_View]  chr4:74054360-74055322 [Contig_View]  PPBPP2 [Vega]
ICGC DataPortalENSG00000248848
TCGA cBioPortalPPBPP2
AceView (NCBI)PPBPP2
Genatlas (Paris)PPBPP2
WikiGenes10895
SOURCE (Princeton)PPBPP2
Genetics Home Reference (NIH)PPBPP2
Genomic and cartography
GoldenPath hg38 (UCSC)PPBPP2  -     chr4:74054360-74055322 -  4q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPBPP2  -     4q13.3   [Description]    (hg19-Feb_2009)
EnsemblPPBPP2 - 4q13.3 [CytoView hg19]  PPBPP2 - 4q13.3 [CytoView hg38]
Mapping of homologs : NCBIPPBPP2 [Mapview hg19]  PPBPP2 [Mapview hg38]
OMIM611591   
Gene and transcription
Genbank (Entrez)BC132938 BC132940 L10403
RefSeq transcript (Entrez)NM_006692
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPBPP2
Cluster EST : UnigeneHs.3134 [ NCBI ]
CGAP (NCI)Hs.3134
Alternative Splicing GalleryENSG00000248848
Gene ExpressionPPBPP2 [ NCBI-GEO ]   PPBPP2 [ EBI - ARRAY_EXPRESS ]   PPBPP2 [ SEEK ]   PPBPP2 [ MEM ]
Gene Expression Viewer (FireBrowse)PPBPP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)10895
GTEX Portal (Tissue expression)PPBPP2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PPBPP2
DMDM Disease mutations10895
Blocks (Seattle)PPBPP2
Human Protein AtlasENSG00000248848
IPIIPI00009136   IPI00929719   
Protein Interaction databases
FunCoupENSG00000248848
BioGRIDPPBPP2
STRING (EMBL)PPBPP2
ZODIACPPBPP2
Ontologies - Pathways
Huge Navigator PPBPP2 [HugePedia]
snp3D : Map Gene to Disease10895
BioCentury BCIQPPBPP2
ClinGenPPBPP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10895
Chemical/Pharm GKB GenePA134910736
Clinical trialPPBPP2
Miscellaneous
canSAR (ICR)PPBPP2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPBPP2
EVEXPPBPP2
GoPubMedPPBPP2
iHOPPPBPP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:37:02 CEST 2017

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