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PPDPFL (pancreatic progenitor cell differentiation and proliferation factor like)

Identity

Alias (NCBI)C8orf22
HGNC (Hugo) PPDPFL
HGNC Previous nameC8orf22
HGNC Previous namechromosome 8 open reading frame 22
LocusID (NCBI) 492307
Atlas_Id 57127
Location 8q11.21  [Link to chromosome band 8q11]
Location_base_pair Starts at 49072344 and ends at 49076093 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)PPDPFL   31745
Cards
Entrez_Gene (NCBI)PPDPFL    pancreatic progenitor cell differentiation and proliferation factor like
AliasesC8orf22
GeneCards (Weizmann)PPDPFL
Ensembl hg19 (Hinxton)ENSG00000168333 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168333 [Gene_View]  ENSG00000168333 [Sequence]  chr8:49072344-49076093 [Contig_View]  PPDPFL [Vega]
ICGC DataPortalENSG00000168333
TCGA cBioPortalPPDPFL
AceView (NCBI)PPDPFL
Genatlas (Paris)PPDPFL
SOURCE (Princeton)PPDPFL
Genetics Home Reference (NIH)PPDPFL
Genomic and cartography
GoldenPath hg38 (UCSC)PPDPFL  -     chr8:49072344-49076093 +  8q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPDPFL  -     8q11.21   [Description]    (hg19-Feb_2009)
GoldenPathPPDPFL - 8q11.21 [CytoView hg19]  PPDPFL - 8q11.21 [CytoView hg38]
ImmunoBaseENSG00000168333
Genome Data Viewer NCBIPPDPFL [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AJ276240 BC017981 BG202040 BX500169 DA820911
RefSeq transcript (Entrez)NM_001007176 NM_001256596 NM_001256597 NM_001256598
Consensus coding sequences : CCDS (NCBI)PPDPFL
Gene ExpressionPPDPFL [ NCBI-GEO ]   PPDPFL [ EBI - ARRAY_EXPRESS ]   PPDPFL [ SEEK ]   PPDPFL [ MEM ]
Gene Expression Viewer (FireBrowse)PPDPFL [ Firebrowse - Broad ]
GenevisibleExpression of PPDPFL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)492307
GTEX Portal (Tissue expression)PPDPFL
Human Protein AtlasENSG00000168333-PPDPFL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWR9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WWR9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WWR9
PhosPhoSitePlusQ8WWR9
Domains : Interpro (EBI)PPDPF   
Domain families : Pfam (Sanger)PPDFL (PF15060)   
Domain families : Pfam (NCBI)pfam15060   
Conserved Domain (NCBI)PPDPFL
SuperfamilyQ8WWR9
AlphaFold pdb e-kbQ8WWR9   
Human Protein Atlas [tissue]ENSG00000168333-PPDPFL [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8WWR9
IntAct (EBI)Q8WWR9
BioGRIDPPDPFL
STRING (EMBL)PPDPFL
ZODIACPPDPFL
Ontologies - Pathways
QuickGOQ8WWR9
Ontology : AmiGOmulticellular organism development  cell differentiation  
Ontology : EGO-EBImulticellular organism development  cell differentiation  
NDEx NetworkPPDPFL
Atlas of Cancer Signalling NetworkPPDPFL
Wikipedia pathwaysPPDPFL
Orthology - Evolution
OrthoDB492307
GeneTree (enSembl)ENSG00000168333
Phylogenetic Trees/Animal Genes : TreeFamPPDPFL
Homologs : HomoloGenePPDPFL
Homology/Alignments : Family Browser (UCSC)PPDPFL
Gene fusions - Rearrangements
Fusion : QuiverPPDPFL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPDPFL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPDPFL
dbVarPPDPFL
ClinVarPPDPFL
MonarchPPDPFL
1000_GenomesPPDPFL 
Exome Variant ServerPPDPFL
GNOMAD BrowserENSG00000168333
Varsome BrowserPPDPFL
ACMGPPDPFL variants
VarityQ8WWR9
Genomic Variants (DGV)PPDPFL [DGVbeta]
DECIPHERPPDPFL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPDPFL 
Mutations
ICGC Data PortalPPDPFL 
TCGA Data PortalPPDPFL 
Broad Tumor PortalPPDPFL
OASIS PortalPPDPFL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPPDPFL  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPPDPFL
Mutations and Diseases : HGMDPPDPFL
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPPDPFL
DgiDB (Drug Gene Interaction Database)PPDPFL
DoCM (Curated mutations)PPDPFL
CIViC (Clinical Interpretations of Variants in Cancer)PPDPFL
Cancer3DPPDPFL
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPPDPFL
MedgenPPDPFL
Genetic Testing Registry PPDPFL
NextProtQ8WWR9 [Medical]
GENETestsPPDPFL
Target ValidationPPDPFL
Huge Navigator PPDPFL [HugePedia]
ClinGenPPDPFL
Clinical trials, drugs, therapy
MyCancerGenomePPDPFL
Protein Interactions : CTDPPDPFL
Pharm GKB GenePA134881233
PharosQ8WWR9
Clinical trialPPDPFL
Miscellaneous
canSAR (ICR)PPDPFL
HarmonizomePPDPFL
DataMed IndexPPDPFL
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPPDPFL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:26:18 CEST 2021

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