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PPDPFL (pancreatic progenitor cell differentiation and proliferation factor like)

Identity

Other aliasC8orf22
HGNC (Hugo) PPDPFL
LocusID (NCBI) 492307
Atlas_Id 57127
Location 8q11.21  [Link to chromosome band 8q11]
Location_base_pair Starts at 49072358 and ends at 49075602 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PPDPFL   31745
Cards
Entrez_Gene (NCBI)PPDPFL  492307  pancreatic progenitor cell differentiation and proliferation factor like
AliasesC8orf22
GeneCards (Weizmann)PPDPFL
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:49072358-49075602 [Contig_View]  PPDPFL [Vega]
TCGA cBioPortalPPDPFL
AceView (NCBI)PPDPFL
Genatlas (Paris)PPDPFL
WikiGenes492307
SOURCE (Princeton)PPDPFL
Genetics Home Reference (NIH)PPDPFL
Genomic and cartography
GoldenPath hg38 (UCSC)PPDPFL  -     chr8:49072358-49075602 +  8q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPDPFL  -     8q11.21   [Description]    (hg19-Feb_2009)
EnsemblPPDPFL - 8q11.21 [CytoView hg19]  PPDPFL - 8q11.21 [CytoView hg38]
Mapping of homologs : NCBIPPDPFL [Mapview hg19]  PPDPFL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ276240 BC017981 BG202040 BX500169 DA820911
RefSeq transcript (Entrez)NM_001007176 NM_001256596 NM_001256597 NM_001256598
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPDPFL
Cluster EST : UnigeneHs.741050 [ NCBI ]
CGAP (NCI)Hs.741050
Gene ExpressionPPDPFL [ NCBI-GEO ]   PPDPFL [ EBI - ARRAY_EXPRESS ]   PPDPFL [ SEEK ]   PPDPFL [ MEM ]
Gene Expression Viewer (FireBrowse)PPDPFL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)492307
GTEX Portal (Tissue expression)PPDPFL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWR9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WWR9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WWR9
Splice isoforms : SwissVarQ8WWR9
PhosPhoSitePlusQ8WWR9
Domains : Interpro (EBI)PPDPF   
Domain families : Pfam (Sanger)PPDFL (PF15060)   
Domain families : Pfam (NCBI)pfam15060   
Conserved Domain (NCBI)PPDPFL
DMDM Disease mutations492307
Blocks (Seattle)PPDPFL
SuperfamilyQ8WWR9
Peptide AtlasQ8WWR9
IPIIPI00383113   IPI00740107   IPI00790803   
Protein Interaction databases
DIP (DOE-UCLA)Q8WWR9
IntAct (EBI)Q8WWR9
BioGRIDPPDPFL
STRING (EMBL)PPDPFL
ZODIACPPDPFL
Ontologies - Pathways
QuickGOQ8WWR9
Ontology : AmiGOcell fate specification  exocrine pancreas development  
Ontology : EGO-EBIcell fate specification  exocrine pancreas development  
NDEx NetworkPPDPFL
Atlas of Cancer Signalling NetworkPPDPFL
Wikipedia pathwaysPPDPFL
Orthology - Evolution
OrthoDB492307
Phylogenetic Trees/Animal Genes : TreeFamPPDPFL
HOVERGENQ8WWR9
HOGENOMQ8WWR9
Homologs : HomoloGenePPDPFL
Homology/Alignments : Family Browser (UCSC)PPDPFL
Gene fusions - Rearrangements
Tumor Fusion PortalPPDPFL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPDPFL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPDPFL
dbVarPPDPFL
ClinVarPPDPFL
1000_GenomesPPDPFL 
Exome Variant ServerPPDPFL
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP492307
Genomic Variants (DGV)PPDPFL [DGVbeta]
DECIPHERPPDPFL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPDPFL 
Mutations
ICGC Data PortalPPDPFL 
TCGA Data PortalPPDPFL 
Broad Tumor PortalPPDPFL
OASIS PortalPPDPFL [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPPDPFL
BioMutasearch PPDPFL
DgiDB (Drug Gene Interaction Database)PPDPFL
DoCM (Curated mutations)PPDPFL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPDPFL (select a term)
intoGenPPDPFL
Cancer3DPPDPFL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPPDPFL
MedgenPPDPFL
Genetic Testing Registry PPDPFL
NextProtQ8WWR9 [Medical]
TSGene492307
GENETestsPPDPFL
Target ValidationPPDPFL
Huge Navigator PPDPFL [HugePedia]
snp3D : Map Gene to Disease492307
BioCentury BCIQPPDPFL
ClinGenPPDPFL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD492307
Chemical/Pharm GKB GenePA134881233
Clinical trialPPDPFL
Miscellaneous
canSAR (ICR)PPDPFL (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPDPFL
EVEXPPDPFL
GoPubMedPPDPFL
iHOPPPDPFL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:29:45 CET 2017

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