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PPFIA2-AS1 (PPFIA2 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PPFIA2-AS1
LocusID (NCBI) 102724663
Atlas_Id 79727
Location 12q21.31  [Link to chromosome band 12q21]
Location_base_pair Starts at 81279189 and ends at 81312422 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPFIA2-AS1   53397
Cards
Entrez_Gene (NCBI)PPFIA2-AS1  102724663  PPFIA2 antisense RNA 1
Aliases
GeneCards (Weizmann)PPFIA2-AS1
Ensembl hg19 (Hinxton)ENSG00000257467 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257467 [Gene_View]  chr12:81279189-81312422 [Contig_View]  PPFIA2-AS1 [Vega]
ICGC DataPortalENSG00000257467
TCGA cBioPortalPPFIA2-AS1
AceView (NCBI)PPFIA2-AS1
Genatlas (Paris)PPFIA2-AS1
WikiGenes102724663
SOURCE (Princeton)PPFIA2-AS1
Genetics Home Reference (NIH)PPFIA2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PPFIA2-AS1  -     chr12:81279189-81312422 +  12q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPFIA2-AS1  -     12q21.31   [Description]    (hg19-Feb_2009)
EnsemblPPFIA2-AS1 - 12q21.31 [CytoView hg19]  PPFIA2-AS1 - 12q21.31 [CytoView hg38]
Mapping of homologs : NCBIPPFIA2-AS1 [Mapview hg19]  PPFIA2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG186381
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPFIA2-AS1
Cluster EST : UnigeneHs.667264 [ NCBI ]
CGAP (NCI)Hs.667264
Alternative Splicing GalleryENSG00000257467
Gene ExpressionPPFIA2-AS1 [ NCBI-GEO ]   PPFIA2-AS1 [ EBI - ARRAY_EXPRESS ]   PPFIA2-AS1 [ SEEK ]   PPFIA2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PPFIA2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724663
GTEX Portal (Tissue expression)PPFIA2-AS1
Human Protein AtlasENSG00000257467-PPFIA2-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PPFIA2-AS1
DMDM Disease mutations102724663
Blocks (Seattle)PPFIA2-AS1
Human Protein Atlas [tissue]ENSG00000257467-PPFIA2-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000257467
BioGRIDPPFIA2-AS1
STRING (EMBL)PPFIA2-AS1
ZODIACPPFIA2-AS1
Ontologies - Pathways
Huge Navigator PPFIA2-AS1 [HugePedia]
snp3D : Map Gene to Disease102724663
BioCentury BCIQPPFIA2-AS1
ClinGenPPFIA2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724663
Clinical trialPPFIA2-AS1
Miscellaneous
canSAR (ICR)PPFIA2-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPFIA2-AS1
EVEXPPFIA2-AS1
GoPubMedPPFIA2-AS1
iHOPPPFIA2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:27:14 CET 2017

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