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PPIAL4E (peptidylprolyl isomerase A like 4E)

Identity

Other aliasCOAS2
HGNC (Hugo) PPIAL4E
LocusID (NCBI) 730262
Atlas_Id 52787
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 144372875 and ends at 144373659 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPIAL4E   33997
Cards
Entrez_Gene (NCBI)PPIAL4E  730262  peptidylprolyl isomerase A like 4E
AliasesCOAS2
GeneCards (Weizmann)PPIAL4E
Ensembl hg19 (Hinxton)ENSG00000271567 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000271567 [Gene_View]  chr1:144372875-144373659 [Contig_View]  PPIAL4E [Vega]
ICGC DataPortalENSG00000271567
TCGA cBioPortalPPIAL4E
AceView (NCBI)PPIAL4E
Genatlas (Paris)PPIAL4E
WikiGenes730262
SOURCE (Princeton)PPIAL4E
Genetics Home Reference (NIH)PPIAL4E
Genomic and cartography
GoldenPath hg38 (UCSC)PPIAL4E  -     chr1:144372875-144373659 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPIAL4E  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblPPIAL4E - 1q21.1 [CytoView hg19]  PPIAL4E - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIPPIAL4E [Mapview hg19]  PPIAL4E [Mapview hg38]
OMIM608608   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001144032
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPIAL4E
Alternative Splicing GalleryENSG00000271567
Gene ExpressionPPIAL4E [ NCBI-GEO ]   PPIAL4E [ EBI - ARRAY_EXPRESS ]   PPIAL4E [ SEEK ]   PPIAL4E [ MEM ]
Gene Expression Viewer (FireBrowse)PPIAL4E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)730262
GTEX Portal (Tissue expression)PPIAL4E
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0A075B759   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0A075B759  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0A075B759
Splice isoforms : SwissVarA0A075B759
PhosPhoSitePlusA0A075B759
Domaine pattern : Prosite (Expaxy)CSA_PPIASE_1 (PS00170)    CSA_PPIASE_2 (PS50072)   
Domains : Interpro (EBI)Cyclophilin-like_dom    Cyclophilin-type_PPIase    Cyclophilin-type_PPIase_CS    Cyclophilin-type_PPIase_dom   
Domain families : Pfam (Sanger)Pro_isomerase (PF00160)   
Domain families : Pfam (NCBI)pfam00160   
Conserved Domain (NCBI)PPIAL4E
DMDM Disease mutations730262
Blocks (Seattle)PPIAL4E
SuperfamilyA0A075B759
Human Protein AtlasENSG00000271567
Peptide AtlasA0A075B759
Protein Interaction databases
DIP (DOE-UCLA)A0A075B759
IntAct (EBI)A0A075B759
FunCoupENSG00000271567
BioGRIDPPIAL4E
STRING (EMBL)PPIAL4E
ZODIACPPIAL4E
Ontologies - Pathways
QuickGOA0A075B759
Ontology : AmiGOprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  cytoplasm  protein folding  
Ontology : EGO-EBIprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  cytoplasm  protein folding  
NDEx NetworkPPIAL4E
Atlas of Cancer Signalling NetworkPPIAL4E
Wikipedia pathwaysPPIAL4E
Orthology - Evolution
OrthoDB730262
GeneTree (enSembl)ENSG00000271567
Phylogenetic Trees/Animal Genes : TreeFamPPIAL4E
HOVERGENA0A075B759
HOGENOMA0A075B759
Homologs : HomoloGenePPIAL4E
Homology/Alignments : Family Browser (UCSC)PPIAL4E
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPIAL4E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPIAL4E
dbVarPPIAL4E
ClinVarPPIAL4E
1000_GenomesPPIAL4E 
Exome Variant ServerPPIAL4E
ExAC (Exome Aggregation Consortium)PPIAL4E (select the gene name)
Genetic variants : HAPMAP730262
Genomic Variants (DGV)PPIAL4E [DGVbeta]
DECIPHERPPIAL4E [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPIAL4E 
Mutations
ICGC Data PortalPPIAL4E 
TCGA Data PortalPPIAL4E 
Broad Tumor PortalPPIAL4E
OASIS PortalPPIAL4E [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPPIAL4E
BioMutasearch PPIAL4E
DgiDB (Drug Gene Interaction Database)PPIAL4E
DoCM (Curated mutations)PPIAL4E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPIAL4E (select a term)
intoGenPPIAL4E
Cancer3DPPIAL4E(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608608   
Orphanet
MedgenPPIAL4E
Genetic Testing Registry PPIAL4E
NextProtA0A075B759 [Medical]
TSGene730262
GENETestsPPIAL4E
Target ValidationPPIAL4E
Huge Navigator PPIAL4E [HugePedia]
snp3D : Map Gene to Disease730262
BioCentury BCIQPPIAL4E
ClinGenPPIAL4E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD730262
Chemical/Pharm GKB GenePA164724924
Clinical trialPPIAL4E
Miscellaneous
canSAR (ICR)PPIAL4E (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPIAL4E
EVEXPPIAL4E
GoPubMedPPIAL4E
iHOPPPIAL4E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:25:54 CEST 2017

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