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PPIAL4G (peptidylprolyl isomerase A like 4G)

Identity

Other aliasCOAS-2
HGNC (Hugo) PPIAL4G
LocusID (NCBI) 644591
Atlas_Id 72126
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 148482548 and ends at 148483285 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPIAL4G   33996
Cards
Entrez_Gene (NCBI)PPIAL4G  644591  peptidylprolyl isomerase A like 4G
AliasesCOAS-2
GeneCards (Weizmann)PPIAL4G
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:148482548-148483285 [Contig_View]  PPIAL4G [Vega]
TCGA cBioPortalPPIAL4G
AceView (NCBI)PPIAL4G
Genatlas (Paris)PPIAL4G
WikiGenes644591
SOURCE (Princeton)PPIAL4G
Genetics Home Reference (NIH)PPIAL4G
Genomic and cartography
GoldenPath hg38 (UCSC)PPIAL4G  -     chr1:148482548-148483285 -  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPIAL4G  -     1q21.2   [Description]    (hg19-Feb_2009)
EnsemblPPIAL4G - 1q21.2 [CytoView hg19]  PPIAL4G - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBIPPIAL4G [Mapview hg19]  PPIAL4G [Mapview hg38]
Gene and transcription
Genbank (Entrez)HQ258079
RefSeq transcript (Entrez)NM_001123068
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPIAL4G
Cluster EST : UnigeneHs.534674 [ NCBI ]
CGAP (NCI)Hs.534674
Gene ExpressionPPIAL4G [ NCBI-GEO ]   PPIAL4G [ EBI - ARRAY_EXPRESS ]   PPIAL4G [ SEEK ]   PPIAL4G [ MEM ]
Gene Expression Viewer (FireBrowse)PPIAL4G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644591
GTEX Portal (Tissue expression)PPIAL4G
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DN37   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DN37  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DN37
Splice isoforms : SwissVarP0DN37
Catalytic activity : Enzyme5.2.1.8 [ Enzyme-Expasy ]   5.2.1.85.2.1.8 [ IntEnz-EBI ]   5.2.1.8 [ BRENDA ]   5.2.1.8 [ KEGG ]   
PhosPhoSitePlusP0DN37
Domaine pattern : Prosite (Expaxy)CSA_PPIASE_1 (PS00170)    CSA_PPIASE_2 (PS50072)   
Domains : Interpro (EBI)Cyclophilin-like_dom    Cyclophilin-type_PPIase    Cyclophilin-type_PPIase_CS    Cyclophilin-type_PPIase_dom   
Domain families : Pfam (Sanger)Pro_isomerase (PF00160)   
Domain families : Pfam (NCBI)pfam00160   
Conserved Domain (NCBI)PPIAL4G
DMDM Disease mutations644591
Blocks (Seattle)PPIAL4G
SuperfamilyP0DN37
Peptide AtlasP0DN37
IPIIPI00657716   IPI00030144   IPI00743690   IPI00975702   
Protein Interaction databases
DIP (DOE-UCLA)P0DN37
IntAct (EBI)P0DN37
BioGRIDPPIAL4G
STRING (EMBL)PPIAL4G
ZODIACPPIAL4G
Ontologies - Pathways
QuickGOP0DN37
Ontology : AmiGOprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  cytoplasm  protein folding  
Ontology : EGO-EBIprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  cytoplasm  protein folding  
NDEx NetworkPPIAL4G
Atlas of Cancer Signalling NetworkPPIAL4G
Wikipedia pathwaysPPIAL4G
Orthology - Evolution
OrthoDB644591
Phylogenetic Trees/Animal Genes : TreeFamPPIAL4G
HOVERGENP0DN37
HOGENOMP0DN37
Homologs : HomoloGenePPIAL4G
Homology/Alignments : Family Browser (UCSC)PPIAL4G
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPIAL4G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPIAL4G
dbVarPPIAL4G
ClinVarPPIAL4G
1000_GenomesPPIAL4G 
Exome Variant ServerPPIAL4G
ExAC (Exome Aggregation Consortium)PPIAL4G (select the gene name)
Genetic variants : HAPMAP644591
Genomic Variants (DGV)PPIAL4G [DGVbeta]
DECIPHERPPIAL4G [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPIAL4G 
Mutations
ICGC Data PortalPPIAL4G 
TCGA Data PortalPPIAL4G 
Broad Tumor PortalPPIAL4G
OASIS PortalPPIAL4G [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPPIAL4G  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPPIAL4G
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PPIAL4G
DgiDB (Drug Gene Interaction Database)PPIAL4G
DoCM (Curated mutations)PPIAL4G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPIAL4G (select a term)
intoGenPPIAL4G
Cancer3DPPIAL4G(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPPIAL4G
Genetic Testing Registry PPIAL4G
NextProtP0DN37 [Medical]
TSGene644591
GENETestsPPIAL4G
Huge Navigator PPIAL4G [HugePedia]
snp3D : Map Gene to Disease644591
BioCentury BCIQPPIAL4G
ClinGenPPIAL4G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644591
Chemical/Pharm GKB GenePA164724931
Clinical trialPPIAL4G
Miscellaneous
canSAR (ICR)PPIAL4G (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPIAL4G
EVEXPPIAL4G
GoPubMedPPIAL4G
iHOPPPIAL4G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:49:20 CEST 2017

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