Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PPIAP30 (peptidylprolyl isomerase A (cyclophilin A) pseudogene 30)

Identity

Other alias-
HGNC (Hugo) PPIAP30
LocusID (NCBI) 100192204
Atlas_Id 72127
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 15196721 and ends at 15197346 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPIAP30   44878
Cards
Entrez_Gene (NCBI)PPIAP30  100192204  peptidylprolyl isomerase A (cyclophilin A) pseudogene 30
Aliases
GeneCards (Weizmann)PPIAP30
Ensembl hg19 (Hinxton) [Gene_View]  chr10:15196721-15197346 [Contig_View]  PPIAP30 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:15196721-15197346 [Contig_View]  PPIAP30 [Vega]
TCGA cBioPortalPPIAP30
AceView (NCBI)PPIAP30
Genatlas (Paris)PPIAP30
WikiGenes100192204
SOURCE (Princeton)PPIAP30
Genetics Home Reference (NIH)PPIAP30
Genomic and cartography
GoldenPath hg19 (UCSC)PPIAP30  -     chr10:15196721-15197346 -  10p13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PPIAP30  -     10p13   [Description]    (hg38-Dec_2013)
EnsemblPPIAP30 - 10p13 [CytoView hg19]  PPIAP30 - 10p13 [CytoView hg38]
Mapping of homologs : NCBIPPIAP30 [Mapview hg19]  PPIAP30 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC157831 BC171823
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000010 NC_018921 NG_008791 NT_008705 NW_004929370
Consensus coding sequences : CCDS (NCBI)PPIAP30
Cluster EST : UnigeneHs.714691 [ NCBI ]
CGAP (NCI)Hs.714691
Gene ExpressionPPIAP30 [ NCBI-GEO ]   PPIAP30 [ EBI - ARRAY_EXPRESS ]   PPIAP30 [ SEEK ]   PPIAP30 [ MEM ]
Gene Expression Viewer (FireBrowse)PPIAP30 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100192204
GTEX Portal (Tissue expression)PPIAP30
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PPIAP30
DMDM Disease mutations100192204
Blocks (Seattle)PPIAP30
Protein Interaction databases
BioGRIDPPIAP30
STRING (EMBL)PPIAP30
ZODIACPPIAP30
Ontologies - Pathways
Huge Navigator PPIAP30 [HugePedia]
snp3D : Map Gene to Disease100192204
BioCentury BCIQPPIAP30
ClinGenPPIAP30
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100192204
Clinical trialPPIAP30
Miscellaneous
canSAR (ICR)PPIAP30 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPIAP30
EVEXPPIAP30
GoPubMedPPIAP30
iHOPPPIAP30
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:39:21 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.