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PPM1K (protein phosphatase, Mg2+/Mn2+ dependent 1K)

Identity

Alias (NCBI)BDP
MSUDMV
PP2Ckappa
PP2Cm
PTMP
UG0882E07
HGNC (Hugo) PPM1K
HGNC Alias symbDKFZp761G058
PP2Ckappa
hPTMP
PP2Cm
BDP
HGNC Alias namePP2C-type mitochondrial phosphoprotein phosphatase
 protein phosphatase 2C kappa
 branched-chain ??-ketoacid dehydrogenase phosphatase
HGNC Previous nameprotein phosphatase 1K (PP2C domain containing)
 protein phosphatase, Mg2+/Mn2+ dependent, 1K
LocusID (NCBI) 152926
Atlas_Id 40324
Location 4q22.1  [Link to chromosome band 4q22]
Location_base_pair Starts at 88257620 and ends at 88284561 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PPM1K (4q22.1) / IDS (Xq28)PPM1K (4q22.1) / LRPPRC (2p21)PPM1K (4q22.1) / PFN3 (5q35.3)
SQSTM1 (5q35.3) / PPM1K (4q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PPM1K   25415
Cards
Entrez_Gene (NCBI)PPM1K    protein phosphatase, Mg2+/Mn2+ dependent 1K
AliasesBDP; MSUDMV; PP2Ckappa; PP2Cm; 
PTMP; UG0882E07
GeneCards (Weizmann)PPM1K
Ensembl hg19 (Hinxton)ENSG00000163644 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163644 [Gene_View]  ENSG00000163644 [Sequence]  chr4:88257620-88284561 [Contig_View]  PPM1K [Vega]
ICGC DataPortalENSG00000163644
TCGA cBioPortalPPM1K
AceView (NCBI)PPM1K
Genatlas (Paris)PPM1K
SOURCE (Princeton)PPM1K
Genetics Home Reference (NIH)PPM1K
Genomic and cartography
GoldenPath hg38 (UCSC)PPM1K  -     chr4:88257620-88284561 -  4q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPM1K  -     4q22.1   [Description]    (hg19-Feb_2009)
GoldenPathPPM1K - 4q22.1 [CytoView hg19]  PPM1K - 4q22.1 [CytoView hg38]
ImmunoBaseENSG00000163644
genome Data Viewer NCBIPPM1K [Mapview hg19]  
OMIM611065   615135   
Gene and transcription
Genbank (Entrez)AF351614 AK054678 AK092450 AK314417 AL834167
RefSeq transcript (Entrez)NM_152542
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPM1K
Alternative Splicing GalleryENSG00000163644
Gene ExpressionPPM1K [ NCBI-GEO ]   PPM1K [ EBI - ARRAY_EXPRESS ]   PPM1K [ SEEK ]   PPM1K [ MEM ]
Gene Expression Viewer (FireBrowse)PPM1K [ Firebrowse - Broad ]
GenevisibleExpression of PPM1K in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)152926
GTEX Portal (Tissue expression)PPM1K
Human Protein AtlasENSG00000163644-PPM1K [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PPM1K
Blocks (Seattle)PPM1K
Human Protein Atlas [tissue]ENSG00000163644-PPM1K [tissue]
HPRD15167
IPIIPI00292799   IPI00217525   IPI00827632   
Protein Interaction databases
BioGRIDPPM1K
STRING (EMBL)PPM1K
ZODIACPPM1K
Ontologies - Pathways
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPPM1K
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:40:32 CET 2021

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