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PPP1R14D (protein phosphatase 1 regulatory inhibitor subunit 14D)

Identity

Alias_namesprotein phosphatase 1
Alias_symbol (synonym)CPI17-like
FLJ20251
GBPI-1
MGC119014
MGC119016
Other aliasGBPI1
HGNC (Hugo) PPP1R14D
LocusID (NCBI) 54866
Atlas_Id 47512
Location 15q15.1  [Link to chromosome band 15q15]
Location_base_pair Starts at 41107643 and ends at 41120907 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DNAJC17 (15q15.1) / PPP1R14D (15q15.1)DNAJC17 15q15.1 / PPP1R14D 15q15.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPP1R14D   14953
Cards
Entrez_Gene (NCBI)PPP1R14D  54866  protein phosphatase 1 regulatory inhibitor subunit 14D
AliasesCPI17-like; GBPI-1; GBPI1
GeneCards (Weizmann)PPP1R14D
Ensembl hg19 (Hinxton)ENSG00000166143 [Gene_View]  chr15:41107643-41120907 [Contig_View]  PPP1R14D [Vega]
Ensembl hg38 (Hinxton)ENSG00000166143 [Gene_View]  chr15:41107643-41120907 [Contig_View]  PPP1R14D [Vega]
ICGC DataPortalENSG00000166143
TCGA cBioPortalPPP1R14D
AceView (NCBI)PPP1R14D
Genatlas (Paris)PPP1R14D
WikiGenes54866
SOURCE (Princeton)PPP1R14D
Genetics Home Reference (NIH)PPP1R14D
Genomic and cartography
GoldenPath hg19 (UCSC)PPP1R14D  -     chr15:41107643-41120907 -  15q15.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PPP1R14D  -     15q15.1   [Description]    (hg38-Dec_2013)
EnsemblPPP1R14D - 15q15.1 [CytoView hg19]  PPP1R14D - 15q15.1 [CytoView hg38]
Mapping of homologs : NCBIPPP1R14D [Mapview hg19]  PPP1R14D [Mapview hg38]
OMIM613256   
Gene and transcription
Genbank (Entrez)AI963626 AK000258 AY050671 BC096716 BC098124
RefSeq transcript (Entrez)NM_001130143 NM_017726
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929398
Consensus coding sequences : CCDS (NCBI)PPP1R14D
Cluster EST : UnigeneHs.192927 [ NCBI ]
CGAP (NCI)Hs.192927
Alternative Splicing GalleryENSG00000166143
Gene ExpressionPPP1R14D [ NCBI-GEO ]   PPP1R14D [ EBI - ARRAY_EXPRESS ]   PPP1R14D [ SEEK ]   PPP1R14D [ MEM ]
Gene Expression Viewer (FireBrowse)PPP1R14D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54866
GTEX Portal (Tissue expression)PPP1R14D
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NXH3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NXH3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NXH3
Splice isoforms : SwissVarQ9NXH3
PhosPhoSitePlusQ9NXH3
Domains : Interpro (EBI)PP1_inhibitor   
Domain families : Pfam (Sanger)PP1_inhibitor (PF05361)   
Domain families : Pfam (NCBI)pfam05361   
Conserved Domain (NCBI)PPP1R14D
DMDM Disease mutations54866
Blocks (Seattle)PPP1R14D
SuperfamilyQ9NXH3
Human Protein AtlasENSG00000166143
Peptide AtlasQ9NXH3
HPRD17891
IPIIPI00796745   IPI00015106   
Protein Interaction databases
DIP (DOE-UCLA)Q9NXH3
IntAct (EBI)Q9NXH3
FunCoupENSG00000166143
BioGRIDPPP1R14D
STRING (EMBL)PPP1R14D
ZODIACPPP1R14D
Ontologies - Pathways
QuickGOQ9NXH3
Ontology : AmiGOprotein serine/threonine phosphatase inhibitor activity  cytoplasm  regulation of protein dephosphorylation  regulation of phosphorylation  negative regulation of catalytic activity  
Ontology : EGO-EBIprotein serine/threonine phosphatase inhibitor activity  cytoplasm  regulation of protein dephosphorylation  regulation of phosphorylation  negative regulation of catalytic activity  
NDEx NetworkPPP1R14D
Atlas of Cancer Signalling NetworkPPP1R14D
Wikipedia pathwaysPPP1R14D
Orthology - Evolution
OrthoDB54866
GeneTree (enSembl)ENSG00000166143
Phylogenetic Trees/Animal Genes : TreeFamPPP1R14D
HOVERGENQ9NXH3
HOGENOMQ9NXH3
Homologs : HomoloGenePPP1R14D
Homology/Alignments : Family Browser (UCSC)PPP1R14D
Gene fusions - Rearrangements
Fusion : MitelmanDNAJC17/PPP1R14D [15q15.1/15q15.1]  [t(15;15)(q15;q15)]  
Fusion: TCGADNAJC17 15q15.1 PPP1R14D 15q15.1 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPP1R14D [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPP1R14D
dbVarPPP1R14D
ClinVarPPP1R14D
1000_GenomesPPP1R14D 
Exome Variant ServerPPP1R14D
ExAC (Exome Aggregation Consortium)PPP1R14D (select the gene name)
Genetic variants : HAPMAP54866
Genomic Variants (DGV)PPP1R14D [DGVbeta]
DECIPHER (Syndromes)15:41107643-41120907  ENSG00000166143
CONAN: Copy Number AnalysisPPP1R14D 
Mutations
ICGC Data PortalPPP1R14D 
TCGA Data PortalPPP1R14D 
Broad Tumor PortalPPP1R14D
OASIS PortalPPP1R14D [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPPP1R14D  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPPP1R14D
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PPP1R14D
DgiDB (Drug Gene Interaction Database)PPP1R14D
DoCM (Curated mutations)PPP1R14D (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPP1R14D (select a term)
intoGenPPP1R14D
Cancer3DPPP1R14D(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613256   
Orphanet
MedgenPPP1R14D
Genetic Testing Registry PPP1R14D
NextProtQ9NXH3 [Medical]
TSGene54866
GENETestsPPP1R14D
Huge Navigator PPP1R14D [HugePedia]
snp3D : Map Gene to Disease54866
BioCentury BCIQPPP1R14D
ClinGenPPP1R14D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54866
Chemical/Pharm GKB GenePA33631
Clinical trialPPP1R14D
Miscellaneous
canSAR (ICR)PPP1R14D (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPP1R14D
EVEXPPP1R14D
GoPubMedPPP1R14D
iHOPPPP1R14D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:15:18 CEST 2017

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