Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PPP1R26-AS1 (PPP1R26 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PPP1R26-AS1
LocusID (NCBI) 100506599
Atlas_Id 72145
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 135462719 and ends at 135472249 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPP1R26-AS1   48717
Cards
Entrez_Gene (NCBI)PPP1R26-AS1  100506599  PPP1R26 antisense RNA 1
Aliases
GeneCards (Weizmann)PPP1R26-AS1
Ensembl hg19 (Hinxton)ENSG00000225361 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225361 [Gene_View]  chr9:135462719-135472249 [Contig_View]  PPP1R26-AS1 [Vega]
ICGC DataPortalENSG00000225361
TCGA cBioPortalPPP1R26-AS1
AceView (NCBI)PPP1R26-AS1
Genatlas (Paris)PPP1R26-AS1
WikiGenes100506599
SOURCE (Princeton)PPP1R26-AS1
Genetics Home Reference (NIH)PPP1R26-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PPP1R26-AS1  -     chr9:135462719-135472249 -  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPP1R26-AS1  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblPPP1R26-AS1 - 9q34.3 [CytoView hg19]  PPP1R26-AS1 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIPPP1R26-AS1 [Mapview hg19]  PPP1R26-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096249 BC043225 BX100027
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPP1R26-AS1
Cluster EST : UnigeneHs.634397 [ NCBI ]
CGAP (NCI)Hs.634397
Alternative Splicing GalleryENSG00000225361
Gene ExpressionPPP1R26-AS1 [ NCBI-GEO ]   PPP1R26-AS1 [ EBI - ARRAY_EXPRESS ]   PPP1R26-AS1 [ SEEK ]   PPP1R26-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PPP1R26-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506599
GTEX Portal (Tissue expression)PPP1R26-AS1
Human Protein AtlasENSG00000225361-PPP1R26-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PPP1R26-AS1
DMDM Disease mutations100506599
Blocks (Seattle)PPP1R26-AS1
Human Protein Atlas [tissue]ENSG00000225361-PPP1R26-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000225361
BioGRIDPPP1R26-AS1
STRING (EMBL)PPP1R26-AS1
ZODIACPPP1R26-AS1
Ontologies - Pathways
Huge Navigator PPP1R26-AS1 [HugePedia]
snp3D : Map Gene to Disease100506599
BioCentury BCIQPPP1R26-AS1
ClinGenPPP1R26-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506599
Clinical trialPPP1R26-AS1
Miscellaneous
canSAR (ICR)PPP1R26-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPP1R26-AS1
EVEXPPP1R26-AS1
GoPubMedPPP1R26-AS1
iHOPPPP1R26-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:08:03 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.