Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PPP1R36 (protein phosphatase 1 regulatory subunit 36)

Identity

Alias_namesC14orf50
chromosome 14 open reading frame 50
protein phosphatase 1, regulatory subunit 36
Other alias
HGNC (Hugo) PPP1R36
LocusID (NCBI) 145376
Atlas_Id 72151
Location 14q23.3  [Link to chromosome band 14q23]
Location_base_pair Starts at 64549902 and ends at 64589379 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPP1R36   20097
Cards
Entrez_Gene (NCBI)PPP1R36  145376  protein phosphatase 1 regulatory subunit 36
AliasesC14orf50
GeneCards (Weizmann)PPP1R36
Ensembl hg19 (Hinxton)ENSG00000165807 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165807 [Gene_View]  chr14:64549902-64589379 [Contig_View]  PPP1R36 [Vega]
ICGC DataPortalENSG00000165807
TCGA cBioPortalPPP1R36
AceView (NCBI)PPP1R36
Genatlas (Paris)PPP1R36
WikiGenes145376
SOURCE (Princeton)PPP1R36
Genetics Home Reference (NIH)PPP1R36
Genomic and cartography
GoldenPath hg38 (UCSC)PPP1R36  -     chr14:64549902-64589379 +  14q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPP1R36  -     14q23.3   [Description]    (hg19-Feb_2009)
EnsemblPPP1R36 - 14q23.3 [CytoView hg19]  PPP1R36 - 14q23.3 [CytoView hg38]
Mapping of homologs : NCBIPPP1R36 [Mapview hg19]  PPP1R36 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK058044 AK130365 BC068989
RefSeq transcript (Entrez)NM_172365
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPP1R36
Cluster EST : UnigeneHs.144696 [ NCBI ]
CGAP (NCI)Hs.144696
Alternative Splicing GalleryENSG00000165807
Gene ExpressionPPP1R36 [ NCBI-GEO ]   PPP1R36 [ EBI - ARRAY_EXPRESS ]   PPP1R36 [ SEEK ]   PPP1R36 [ MEM ]
Gene Expression Viewer (FireBrowse)PPP1R36 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145376
GTEX Portal (Tissue expression)PPP1R36
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LQ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LQ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LQ0
Splice isoforms : SwissVarQ96LQ0
PhosPhoSitePlusQ96LQ0
Domains : Interpro (EBI)Pro_pase_1_reg_su_36   
Domain families : Pfam (Sanger)PPPI_inhib (PF14895)   
Domain families : Pfam (NCBI)pfam14895   
Conserved Domain (NCBI)PPP1R36
DMDM Disease mutations145376
Blocks (Seattle)PPP1R36
SuperfamilyQ96LQ0
Human Protein AtlasENSG00000165807
Peptide AtlasQ96LQ0
HPRD08505
IPIIPI00065144   IPI00980270   IPI01026583   
Protein Interaction databases
DIP (DOE-UCLA)Q96LQ0
IntAct (EBI)Q96LQ0
FunCoupENSG00000165807
BioGRIDPPP1R36
STRING (EMBL)PPP1R36
ZODIACPPP1R36
Ontologies - Pathways
QuickGOQ96LQ0
Ontology : AmiGOprotein phosphatase inhibitor activity  negative regulation of phosphatase activity  phosphatase binding  
Ontology : EGO-EBIprotein phosphatase inhibitor activity  negative regulation of phosphatase activity  phosphatase binding  
NDEx NetworkPPP1R36
Atlas of Cancer Signalling NetworkPPP1R36
Wikipedia pathwaysPPP1R36
Orthology - Evolution
OrthoDB145376
GeneTree (enSembl)ENSG00000165807
Phylogenetic Trees/Animal Genes : TreeFamPPP1R36
HOVERGENQ96LQ0
HOGENOMQ96LQ0
Homologs : HomoloGenePPP1R36
Homology/Alignments : Family Browser (UCSC)PPP1R36
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPP1R36 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPP1R36
dbVarPPP1R36
ClinVarPPP1R36
1000_GenomesPPP1R36 
Exome Variant ServerPPP1R36
ExAC (Exome Aggregation Consortium)PPP1R36 (select the gene name)
Genetic variants : HAPMAP145376
Genomic Variants (DGV)PPP1R36 [DGVbeta]
DECIPHERPPP1R36 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPP1R36 
Mutations
ICGC Data PortalPPP1R36 
TCGA Data PortalPPP1R36 
Broad Tumor PortalPPP1R36
OASIS PortalPPP1R36 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPPP1R36
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PPP1R36
DgiDB (Drug Gene Interaction Database)PPP1R36
DoCM (Curated mutations)PPP1R36 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPP1R36 (select a term)
intoGenPPP1R36
Cancer3DPPP1R36(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPPP1R36
Genetic Testing Registry PPP1R36
NextProtQ96LQ0 [Medical]
TSGene145376
GENETestsPPP1R36
Target ValidationPPP1R36
Huge Navigator PPP1R36 [HugePedia]
snp3D : Map Gene to Disease145376
BioCentury BCIQPPP1R36
ClinGenPPP1R36
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145376
Chemical/Pharm GKB GenePA134955014
Clinical trialPPP1R36
Miscellaneous
canSAR (ICR)PPP1R36 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPP1R36
EVEXPPP1R36
GoPubMedPPP1R36
iHOPPPP1R36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:35:07 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.