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PPP1R3C (protein phosphatase 1 regulatory subunit 3C)

Identity

Alias (NCBI)PPP1R5
PTG
HGNC (Hugo) PPP1R3C
HGNC Alias symbPTG
HGNC Alias namePhosphatase 1, regulatory inhibitor subunit 5
 protein targeting to glycogen
HGNC Previous namePPP1R5
HGNC Previous nameprotein phosphatase 1, regulatory (inhibitor) subunit 3C
 protein phosphatase 1, regulatory subunit 3C
LocusID (NCBI) 5507
Atlas_Id 46712
Location 10q23.32  [Link to chromosome band 10q23]
Location_base_pair Starts at 91628442 and ends at 91633071 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PPP1R3C   9293
Cards
Entrez_Gene (NCBI)PPP1R3C    protein phosphatase 1 regulatory subunit 3C
AliasesPPP1R5; PTG
GeneCards (Weizmann)PPP1R3C
Ensembl hg19 (Hinxton)ENSG00000119938 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119938 [Gene_View]  ENSG00000119938 [Sequence]  chr10:91628442-91633071 [Contig_View]  PPP1R3C [Vega]
ICGC DataPortalENSG00000119938
TCGA cBioPortalPPP1R3C
AceView (NCBI)PPP1R3C
Genatlas (Paris)PPP1R3C
SOURCE (Princeton)PPP1R3C
Genetics Home Reference (NIH)PPP1R3C
Genomic and cartography
GoldenPath hg38 (UCSC)PPP1R3C  -     chr10:91628442-91633071 -  10q23.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPP1R3C  -     10q23.32   [Description]    (hg19-Feb_2009)
GoldenPathPPP1R3C - 10q23.32 [CytoView hg19]  PPP1R3C - 10q23.32 [CytoView hg38]
ImmunoBaseENSG00000119938
Genome Data Viewer NCBIPPP1R3C [Mapview hg19]  
OMIM602999   
Gene and transcription
Genbank (Entrez)AF087874 AI766011 AK299392 AK299398 AK313149
RefSeq transcript (Entrez)NM_005398
Consensus coding sequences : CCDS (NCBI)PPP1R3C
Gene ExpressionPPP1R3C [ NCBI-GEO ]   PPP1R3C [ EBI - ARRAY_EXPRESS ]   PPP1R3C [ SEEK ]   PPP1R3C [ MEM ]
Gene Expression Viewer (FireBrowse)PPP1R3C [ Firebrowse - Broad ]
GenevisibleExpression of PPP1R3C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5507
GTEX Portal (Tissue expression)PPP1R3C
Human Protein AtlasENSG00000119938-PPP1R3C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UQK1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UQK1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UQK1
PhosPhoSitePlusQ9UQK1
Domaine pattern : Prosite (Expaxy)CBM21 (PS51159)   
Domains : Interpro (EBI)CBM21_dom    CBM21_dom_sf    Pase-1_reg-su_3B/C/D_met    PP1_3C   
Domain families : Pfam (Sanger)CBM_21 (PF03370)   
Domain families : Pfam (NCBI)pfam03370   
Conserved Domain (NCBI)PPP1R3C
SuperfamilyQ9UQK1
AlphaFold pdb e-kbQ9UQK1   
Human Protein Atlas [tissue]ENSG00000119938-PPP1R3C [tissue]
HPRD04298
Protein Interaction databases
DIP (DOE-UCLA)Q9UQK1
IntAct (EBI)Q9UQK1
BioGRIDPPP1R3C
STRING (EMBL)PPP1R3C
ZODIACPPP1R3C
Ontologies - Pathways
QuickGOQ9UQK1
Ontology : AmiGOprotein phosphatase type 1 complex  protein serine/threonine phosphatase activity  protein binding  cytosol  glycogen metabolic process  glycogen biosynthetic process  glycogen biosynthetic process  regulation of glycogen biosynthetic process  protein dephosphorylation  protein phosphatase 1 binding  protein phosphatase binding  glycogen binding  
Ontology : EGO-EBIprotein phosphatase type 1 complex  protein serine/threonine phosphatase activity  protein binding  cytosol  glycogen metabolic process  glycogen biosynthetic process  glycogen biosynthetic process  regulation of glycogen biosynthetic process  protein dephosphorylation  protein phosphatase 1 binding  protein phosphatase binding  glycogen binding  
Pathways : KEGGInsulin signaling pathway   
NDEx NetworkPPP1R3C
Atlas of Cancer Signalling NetworkPPP1R3C
Wikipedia pathwaysPPP1R3C
Orthology - Evolution
OrthoDB5507
GeneTree (enSembl)ENSG00000119938
Phylogenetic Trees/Animal Genes : TreeFamPPP1R3C
Homologs : HomoloGenePPP1R3C
Homology/Alignments : Family Browser (UCSC)PPP1R3C
Gene fusions - Rearrangements
Fusion : QuiverPPP1R3C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPP1R3C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPP1R3C
dbVarPPP1R3C
ClinVarPPP1R3C
MonarchPPP1R3C
1000_GenomesPPP1R3C 
Exome Variant ServerPPP1R3C
GNOMAD BrowserENSG00000119938
Varsome BrowserPPP1R3C
ACMGPPP1R3C variants
VarityQ9UQK1
Genomic Variants (DGV)PPP1R3C [DGVbeta]
DECIPHERPPP1R3C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPP1R3C 
Mutations
ICGC Data PortalPPP1R3C 
TCGA Data PortalPPP1R3C 
Broad Tumor PortalPPP1R3C
OASIS PortalPPP1R3C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPPP1R3C  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPPP1R3C
Mutations and Diseases : HGMDPPP1R3C
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPPP1R3C
DgiDB (Drug Gene Interaction Database)PPP1R3C
DoCM (Curated mutations)PPP1R3C
CIViC (Clinical Interpretations of Variants in Cancer)PPP1R3C
Cancer3DPPP1R3C
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602999   
Orphanet
DisGeNETPPP1R3C
MedgenPPP1R3C
Genetic Testing Registry PPP1R3C
NextProtQ9UQK1 [Medical]
GENETestsPPP1R3C
Target ValidationPPP1R3C
Huge Navigator PPP1R3C [HugePedia]
ClinGenPPP1R3C
Clinical trials, drugs, therapy
MyCancerGenomePPP1R3C
Protein Interactions : CTDPPP1R3C
Pharm GKB GenePA33653
PharosQ9UQK1
Clinical trialPPP1R3C
Miscellaneous
canSAR (ICR)PPP1R3C
HarmonizomePPP1R3C
DataMed IndexPPP1R3C
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPPP1R3C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:26:28 CEST 2021

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