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PPP1R3E (protein phosphatase 1 regulatory subunit 3E)

Identity

Alias_namesprotein phosphatase 1, regulatory (inhibitor) subunit 3E
protein phosphatase 1, regulatory subunit 3E
Alias_symbol (synonym)FLJ00089
Other alias-
HGNC (Hugo) PPP1R3E
LocusID (NCBI) 90673
Atlas_Id 47484
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 23295921 and ends at 23302848 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPP1R3E   14943
Cards
Entrez_Gene (NCBI)PPP1R3E  90673  protein phosphatase 1 regulatory subunit 3E
Aliases
GeneCards (Weizmann)PPP1R3E
Ensembl hg19 (Hinxton)ENSG00000235194 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235194 [Gene_View]  ENSG00000235194 [Sequence]  chr14:23295921-23302848 [Contig_View]  PPP1R3E [Vega]
ICGC DataPortalENSG00000235194
TCGA cBioPortalPPP1R3E
AceView (NCBI)PPP1R3E
Genatlas (Paris)PPP1R3E
WikiGenes90673
SOURCE (Princeton)PPP1R3E
Genetics Home Reference (NIH)PPP1R3E
Genomic and cartography
GoldenPath hg38 (UCSC)PPP1R3E  -     chr14:23295921-23302848 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPP1R3E  -     14q11.2   [Description]    (hg19-Feb_2009)
GoldenPathPPP1R3E - 14q11.2 [CytoView hg19]  PPP1R3E - 14q11.2 [CytoView hg38]
ImmunoBaseENSG00000235194
Mapping of homologs : NCBIPPP1R3E [Mapview hg19]  PPP1R3E [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024489 AK091943 AK296016 AW663470 BC039400
RefSeq transcript (Entrez)NM_001276318
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPP1R3E
Cluster EST : UnigeneHs.601513 [ NCBI ]
CGAP (NCI)Hs.601513
Alternative Splicing GalleryENSG00000235194
Gene ExpressionPPP1R3E [ NCBI-GEO ]   PPP1R3E [ EBI - ARRAY_EXPRESS ]   PPP1R3E [ SEEK ]   PPP1R3E [ MEM ]
Gene Expression Viewer (FireBrowse)PPP1R3E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90673
GTEX Portal (Tissue expression)PPP1R3E
Human Protein AtlasENSG00000235194-PPP1R3E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7J1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H7J1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H7J1
Splice isoforms : SwissVarQ9H7J1
PhosPhoSitePlusQ9H7J1
Domaine pattern : Prosite (Expaxy)CBM21 (PS51159)   
Domains : Interpro (EBI)CBM21_dom    CBM21_dom_sf   
Domain families : Pfam (Sanger)CBM_21 (PF03370)   
Domain families : Pfam (NCBI)pfam03370   
Conserved Domain (NCBI)PPP1R3E
DMDM Disease mutations90673
Blocks (Seattle)PPP1R3E
SuperfamilyQ9H7J1
Human Protein Atlas [tissue]ENSG00000235194-PPP1R3E [tissue]
Peptide AtlasQ9H7J1
IPIIPI00642162   IPI00383948   
Protein Interaction databases
DIP (DOE-UCLA)Q9H7J1
IntAct (EBI)Q9H7J1
FunCoupENSG00000235194
BioGRIDPPP1R3E
STRING (EMBL)PPP1R3E
ZODIACPPP1R3E
Ontologies - Pathways
QuickGOQ9H7J1
Ontology : AmiGOglycogen metabolic process  protein dephosphorylation  glycogen granule  positive regulation of glycogen biosynthetic process  [phosphorylase] phosphatase activity  
Ontology : EGO-EBIglycogen metabolic process  protein dephosphorylation  glycogen granule  positive regulation of glycogen biosynthetic process  [phosphorylase] phosphatase activity  
Pathways : KEGGInsulin signaling pathway   
NDEx NetworkPPP1R3E
Atlas of Cancer Signalling NetworkPPP1R3E
Wikipedia pathwaysPPP1R3E
Orthology - Evolution
OrthoDB90673
GeneTree (enSembl)ENSG00000235194
Phylogenetic Trees/Animal Genes : TreeFamPPP1R3E
HOGENOMQ9H7J1
Homologs : HomoloGenePPP1R3E
Homology/Alignments : Family Browser (UCSC)PPP1R3E
Gene fusions - Rearrangements
Fusion : QuiverPPP1R3E
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPP1R3E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPP1R3E
dbVarPPP1R3E
ClinVarPPP1R3E
1000_GenomesPPP1R3E 
Exome Variant ServerPPP1R3E
ExAC (Exome Aggregation Consortium)ENSG00000235194
GNOMAD BrowserENSG00000235194
Varsome BrowserPPP1R3E
Genetic variants : HAPMAP90673
Genomic Variants (DGV)PPP1R3E [DGVbeta]
DECIPHERPPP1R3E [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPP1R3E 
Mutations
ICGC Data PortalPPP1R3E 
TCGA Data PortalPPP1R3E 
Broad Tumor PortalPPP1R3E
OASIS PortalPPP1R3E [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPPP1R3E  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPPP1R3E
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PPP1R3E
DgiDB (Drug Gene Interaction Database)PPP1R3E
DoCM (Curated mutations)PPP1R3E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPP1R3E (select a term)
intoGenPPP1R3E
Cancer3DPPP1R3E(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPPP1R3E
MedgenPPP1R3E
Genetic Testing Registry PPP1R3E
NextProtQ9H7J1 [Medical]
TSGene90673
GENETestsPPP1R3E
Target ValidationPPP1R3E
Huge Navigator PPP1R3E [HugePedia]
snp3D : Map Gene to Disease90673
BioCentury BCIQPPP1R3E
ClinGenPPP1R3E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90673
Chemical/Pharm GKB GenePA33655
Clinical trialPPP1R3E
Miscellaneous
canSAR (ICR)PPP1R3E (select the gene name)
DataMed IndexPPP1R3E
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPP1R3E
EVEXPPP1R3E
GoPubMedPPP1R3E
iHOPPPP1R3E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jun 7 18:13:46 CEST 2019

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