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PPP3CB-AS1 (PPP3CB antisense RNA 1 (head to head))

Identity

Alias_symbol (synonym)USP54-AS1
Other alias
HGNC (Hugo) PPP3CB-AS1
LocusID (NCBI) 101929145
Atlas_Id 77720
Location 10q22.2  [Link to chromosome band 10q22]
Location_base_pair Starts at 73495752 and ends at 73507309 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPP3CB-AS1   50750
Cards
Entrez_Gene (NCBI)PPP3CB-AS1  101929145  PPP3CB antisense RNA 1 (head to head)
AliasesUSP54-AS1
GeneCards (Weizmann)PPP3CB-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:73495752-73507309 [Contig_View]  PPP3CB-AS1 [Vega]
TCGA cBioPortalPPP3CB-AS1
AceView (NCBI)PPP3CB-AS1
Genatlas (Paris)PPP3CB-AS1
WikiGenes101929145
SOURCE (Princeton)PPP3CB-AS1
Genetics Home Reference (NIH)PPP3CB-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PPP3CB-AS1  -     chr10:73495752-73507309 +  10q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPP3CB-AS1  -     10q22.2   [Description]    (hg19-Feb_2009)
EnsemblPPP3CB-AS1 - 10q22.2 [CytoView hg19]  PPP3CB-AS1 - 10q22.2 [CytoView hg38]
Mapping of homologs : NCBIPPP3CB-AS1 [Mapview hg19]  PPP3CB-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI076941 BC080555 BU150385 DA883449 DB134060
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPP3CB-AS1
Cluster EST : UnigeneHs.665421 [ NCBI ]
CGAP (NCI)Hs.665421
Gene ExpressionPPP3CB-AS1 [ NCBI-GEO ]   PPP3CB-AS1 [ EBI - ARRAY_EXPRESS ]   PPP3CB-AS1 [ SEEK ]   PPP3CB-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PPP3CB-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929145
GTEX Portal (Tissue expression)PPP3CB-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PPP3CB-AS1
DMDM Disease mutations101929145
Blocks (Seattle)PPP3CB-AS1
Protein Interaction databases
BioGRIDPPP3CB-AS1
STRING (EMBL)PPP3CB-AS1
ZODIACPPP3CB-AS1
Ontologies - Pathways
Huge Navigator PPP3CB-AS1 [HugePedia]
snp3D : Map Gene to Disease101929145
BioCentury BCIQPPP3CB-AS1
ClinGenPPP3CB-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929145
Clinical trialPPP3CB-AS1
Miscellaneous
canSAR (ICR)PPP3CB-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPP3CB-AS1
EVEXPPP3CB-AS1
GoPubMedPPP3CB-AS1
iHOPPPP3CB-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:22:24 CET 2017

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